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Chlorine in PDB 4ngu: Crystal Structure of A Trap Periplasmic Solute Binding Protein From Desulfovibrio Alaskensis G20 (DDE_1548), Target Efi-510103, with Bound D-Ala-D-Ala

Protein crystallography data

The structure of Crystal Structure of A Trap Periplasmic Solute Binding Protein From Desulfovibrio Alaskensis G20 (DDE_1548), Target Efi-510103, with Bound D-Ala-D-Ala, PDB code: 4ngu was solved by M.W.Vetting, N.F.Al Obaidi, L.L.Morisco, S.R.Wasserman, S.Sojitra, M.Stead, J.D.Attonito, A.Scott Glenn, S.Chowdhury, B.Evans, B.Hillerich, J.Love, R.D.Seidel, H.J.Imker, J.A.Gerlt, S.C.Almo, Enzyme Functioninitiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.97 / 2.50
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 91.607, 91.607, 129.027, 90.00, 90.00, 90.00
R / Rfree (%) 19 / 24.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Trap Periplasmic Solute Binding Protein From Desulfovibrio Alaskensis G20 (DDE_1548), Target Efi-510103, with Bound D-Ala-D-Ala (pdb code 4ngu). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of A Trap Periplasmic Solute Binding Protein From Desulfovibrio Alaskensis G20 (DDE_1548), Target Efi-510103, with Bound D-Ala-D-Ala, PDB code: 4ngu:

Chlorine binding site 1 out of 1 in 4ngu

Go back to Chlorine Binding Sites List in 4ngu
Chlorine binding site 1 out of 1 in the Crystal Structure of A Trap Periplasmic Solute Binding Protein From Desulfovibrio Alaskensis G20 (DDE_1548), Target Efi-510103, with Bound D-Ala-D-Ala


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Trap Periplasmic Solute Binding Protein From Desulfovibrio Alaskensis G20 (DDE_1548), Target Efi-510103, with Bound D-Ala-D-Ala within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:12.1
occ:1.00
N A:GLY158 3.1 7.9 1.0
NH1 A:ARG288 3.2 9.2 1.0
N A:THR222 3.6 8.5 1.0
CD A:PRO221 3.7 8.3 1.0
CB A:PRO221 3.8 10.4 1.0
CD A:ARG288 3.8 9.7 1.0
CG2 A:THR222 3.9 7.1 1.0
N A:PRO221 3.9 10.9 1.0
CA A:GLY157 3.9 7.6 1.0
CG2 A:VAL285 3.9 9.9 1.0
C A:GLY157 3.9 8.1 1.0
CA A:GLY158 4.0 7.9 1.0
CG A:PRO221 4.0 11.6 1.0
CZ A:ARG288 4.1 10.2 1.0
CB A:PRO220 4.2 8.5 1.0
OG1 A:THR222 4.2 11.7 1.0
CA A:PRO221 4.2 10.2 1.0
C A:PRO221 4.3 9.9 1.0
NE A:ARG288 4.4 9.0 1.0
CB A:THR222 4.4 9.4 1.0
CA A:THR222 4.5 9.1 1.0
C A:PRO220 4.5 9.9 1.0
CB A:VAL285 4.7 14.0 1.0
CA A:VAL285 4.7 14.9 1.0
CA A:PRO220 4.8 10.0 1.0
CG1 A:VAL281 4.8 7.7 1.0
CB A:ARG288 4.8 9.0 1.0
CG1 A:VAL285 4.8 10.5 1.0
CG A:ARG288 4.9 9.0 1.0
C A:GLY158 4.9 11.4 1.0

Reference:

M.W.Vetting, N.F.Al Obaidi, L.L.Morisco, S.R.Wasserman, S.Sojitra, M.Stead, J.D.Attonito, A.Scott Glenn, S.Chowdhury, B.Evans, B.Hillerich, J.Love, R.D.Seidel, H.J.Imker, J.A.Gerlt, S.C.Almo. Crystal Structure of A Trap Periplasmic Solute Binding Protein From Desulfovibrio Alaskensis G20 (DDE_1548), Target Efi-510103, with Bound D-Ala-D-Ala To Be Published.
Page generated: Sun Jul 21 22:13:43 2024

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