Atomistry » Chlorine » PDB 4ngs-4ntd » 4nqa
Atomistry »
  Chlorine »
    PDB 4ngs-4ntd »
      4nqa »

Chlorine in PDB 4nqa: Crystal Structure of Liganded Hrxr-Alpha/Hlxr-Beta Heterodimer on Dna

Protein crystallography data

The structure of Crystal Structure of Liganded Hrxr-Alpha/Hlxr-Beta Heterodimer on Dna, PDB code: 4nqa was solved by X.H.Lou, G.Toresson, C.Benod, J.H.Suh, K.J.Phillips, P.Webb, J.A.Gustafsson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.97 / 3.10
Space group P 43
Cell size a, b, c (Å), α, β, γ (°) 85.783, 85.783, 238.577, 90.00, 90.00, 90.00
R / Rfree (%) 18 / 21.8

Other elements in 4nqa:

The structure of Crystal Structure of Liganded Hrxr-Alpha/Hlxr-Beta Heterodimer on Dna also contains other interesting chemical elements:

Fluorine (F) 6 atoms
Zinc (Zn) 8 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Liganded Hrxr-Alpha/Hlxr-Beta Heterodimer on Dna (pdb code 4nqa). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Liganded Hrxr-Alpha/Hlxr-Beta Heterodimer on Dna, PDB code: 4nqa:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4nqa

Go back to Chlorine Binding Sites List in 4nqa
Chlorine binding site 1 out of 2 in the Crystal Structure of Liganded Hrxr-Alpha/Hlxr-Beta Heterodimer on Dna


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Liganded Hrxr-Alpha/Hlxr-Beta Heterodimer on Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl501

b:66.0
occ:1.00
CL4 B:965501 0.0 66.0 1.0
C19 B:965501 1.8 66.0 1.0
F40 B:965501 2.5 66.0 1.0
C20 B:965501 2.7 66.0 1.0
C18 B:965501 2.7 66.0 1.0
C39 B:965501 3.0 66.0 1.0
C16 B:965501 3.1 66.0 1.0
F41 B:965501 3.5 66.0 1.0
C21 B:965501 4.0 66.0 1.0
C23 B:965501 4.0 66.0 1.0
CE1 B:PHE268 4.2 74.8 1.0
CD2 B:LEU345 4.2 52.2 1.0
F42 B:965501 4.3 66.0 1.0
N09 B:965501 4.3 66.0 1.0
C08 B:965501 4.3 66.0 1.0
CD1 B:LEU345 4.4 52.2 1.0
CG2 B:THR272 4.4 68.9 1.0
C22 B:965501 4.5 66.0 1.0
CB B:PHE271 4.5 60.1 1.0
CD1 B:PHE268 4.6 74.8 1.0
CG B:LEU345 4.9 52.2 1.0
N B:THR272 4.9 68.9 1.0
C B:PHE271 5.0 60.1 1.0

Chlorine binding site 2 out of 2 in 4nqa

Go back to Chlorine Binding Sites List in 4nqa
Chlorine binding site 2 out of 2 in the Crystal Structure of Liganded Hrxr-Alpha/Hlxr-Beta Heterodimer on Dna


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Liganded Hrxr-Alpha/Hlxr-Beta Heterodimer on Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Cl501

b:59.0
occ:1.00
CL4 I:965501 0.0 59.0 1.0
C19 I:965501 1.8 59.0 1.0
C20 I:965501 2.7 59.0 1.0
C18 I:965501 2.7 59.0 1.0
F40 I:965501 2.9 59.0 1.0
C39 I:965501 3.0 59.0 1.0
F41 I:965501 3.1 59.0 1.0
C16 I:965501 3.1 59.0 1.0
CE1 I:PHE268 4.0 64.3 1.0
C21 I:965501 4.0 59.0 1.0
C23 I:965501 4.0 59.0 1.0
OG1 I:THR272 4.1 58.3 1.0
CB I:PHE271 4.2 47.9 1.0
CD2 I:LEU345 4.2 27.7 1.0
CD1 I:PHE268 4.4 64.3 1.0
F42 I:965501 4.4 59.0 1.0
N I:THR272 4.4 58.3 1.0
C I:PHE271 4.4 47.9 1.0
N09 I:965501 4.4 59.0 1.0
O I:PHE271 4.5 47.9 1.0
CA I:THR272 4.5 58.3 1.0
C22 I:965501 4.5 59.0 1.0
CZ I:PHE268 4.6 64.3 1.0
CD1 I:LEU345 4.7 27.7 1.0
O I:PHE268 4.7 64.3 1.0
C08 I:965501 4.7 59.0 1.0
CB I:THR272 4.9 58.3 1.0
CA I:PHE271 5.0 47.9 1.0
CG I:LEU345 5.0 27.7 1.0

Reference:

X.Lou, G.Toresson, C.Benod, J.H.Suh, K.J.Philips, P.Webb, J.A.Gustafsson. Structure of the Retinoid X Receptor Alpha-Liver X Receptor Beta (Rxr Alpha-Lxr Beta ) Heterodimer on Dna. Nat.Struct.Mol.Biol. V. 21 277 2014.
ISSN: ISSN 1545-9993
PubMed: 24561505
DOI: 10.1038/NSMB.2778
Page generated: Fri Jul 11 19:41:33 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy