Chlorine in PDB 4o88: Crystal Structure of A C-Tagged Nuclease

The structure of Crystal Structure of A C-Tagged Nuclease, PDB code: 4o88 was solved by A.K.Chakravarty, P.Smith, S.Shuman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.95 / 2.90
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	61.879, 77.455, 147.920, 90.00, 90.00, 90.00
R / Rfree (%)	18.8 / 24.7

The binding sites of Chlorine atom in the Crystal Structure of A C-Tagged Nuclease (pdb code 4o88). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A C-Tagged Nuclease, PDB code: 4o88:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of A C-Tagged Nuclease


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A C-Tagged Nuclease within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl401 b:55.2 occ:1.00 OG1 A:THR4 3.1 38.5 1.0 CE2 A:TYR83 3.3 32.4 1.0 CD A:PRO3 3.7 31.0 1.0 N A:PRO3 3.9 35.9 1.0 O A:HOH588 4.0 25.2 1.0 N A:THR4 4.1 26.8 1.0 OH A:TYR83 4.1 37.8 1.0 CD2 A:TYR83 4.2 35.5 1.0 CZ A:TYR83 4.2 35.5 1.0 OG1 A:THR5 4.3 35.5 1.0 CB A:THR4 4.4 20.0 1.0 CA A:THR4 4.7 22.6 1.0 N A:THR5 4.8 19.7 1.0 CG2 A:THR4 4.9 20.7 1.0 CG A:PRO3 4.9 25.5 1.0 CD A:LYS175 4.9 22.1 1.0 CG A:LYS175 4.9 21.8 1.0 CA A:PRO3 4.9 29.8 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of A C-Tagged Nuclease


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A C-Tagged Nuclease within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl401 b:58.0 occ:1.00 OG1 B:THR4 3.2 31.8 1.0 CE2 B:TYR83 3.7 43.6 1.0 CD B:PRO3 3.7 38.9 1.0 OG1 B:THR5 3.8 40.9 1.0 N B:PRO3 3.8 41.3 1.0 O B:HOH546 3.8 25.6 1.0 N B:THR4 4.0 22.9 1.0 OH B:TYR83 4.3 33.5 1.0 NE B:ARG172 4.3 60.7 1.0 CD B:ARG172 4.3 55.8 1.0 CB B:THR4 4.4 30.6 1.0 CZ B:ARG172 4.4 53.3 1.0 N B:THR5 4.4 24.5 1.0 NH2 B:ARG172 4.5 44.2 1.0 CZ B:TYR83 4.5 35.0 1.0 CD2 B:TYR83 4.6 41.5 1.0 CA B:THR4 4.6 21.2 1.0 CG2 B:THR5 4.7 22.0 1.0 CB B:THR5 4.8 30.0 1.0 C B:THR4 4.9 34.2 1.0 CA B:PRO3 4.9 35.7 1.0 C B:PRO3 5.0 31.1 1.0

A.K.Chakravarty, P.Smith, R.Jalan, S.Shuman. Structure, Mechanism, and Specificity of A Eukaryal Trna Restriction Enzyme Involved in Self-Nonself Discrimination. Cell Rep V. 7 339 2014.
ISSN: ESSN 2211-1247
PubMed: 24726365
DOI: 10.1016/J.CELREP.2014.03.034