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Chlorine in PDB 4ofk: Crystal Structure of Syg-2 D4

Protein crystallography data

The structure of Crystal Structure of Syg-2 D4, PDB code: 4ofk was solved by E.Ozkan, D.Borek, Z.Otwinowski, K.C.Garcia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.13 / 1.80
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 61.812, 54.131, 63.623, 90.00, 104.61, 90.00
R / Rfree (%) 19.1 / 21.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Syg-2 D4 (pdb code 4ofk). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Syg-2 D4, PDB code: 4ofk:

Chlorine binding site 1 out of 1 in 4ofk

Go back to Chlorine Binding Sites List in 4ofk
Chlorine binding site 1 out of 1 in the Crystal Structure of Syg-2 D4


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Syg-2 D4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl902

b:65.2
occ:1.00
N A:SER340 3.4 36.8 1.0
ND2 A:ASN341 3.8 49.4 1.0
N A:ASN341 3.8 37.1 1.0
O A:HOH1035 4.1 44.8 1.0
CA A:SER340 4.2 38.1 1.0
CA A:GLU339 4.2 38.0 1.0
CB A:SER340 4.2 43.8 1.0
C A:GLU339 4.3 34.0 1.0
O A:ASN341 4.4 46.2 1.0
C A:SER340 4.5 35.7 1.0
CB A:ASN341 4.6 47.0 1.0
CB A:GLU339 4.6 44.4 1.0
CG A:ASN341 4.7 49.3 1.0
CA A:ASN341 4.7 40.4 1.0
OG A:SER340 4.8 46.4 1.0

Reference:

E.Ozkan, P.H.Chia, R.R.Wang, N.Goriatcheva, D.Borek, Z.Otwinowski, T.Walz, K.Shen, K.C.Garcia. Extracellular Architecture of the Syg-1/Syg-2 Adhesion Complex Instructs Synaptogenesis. Cell(Cambridge,Mass.) V. 156 482 2014.
ISSN: ISSN 0092-8674
PubMed: 24485456
DOI: 10.1016/J.CELL.2014.01.004
Page generated: Fri Jul 11 20:01:45 2025

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