Chlorine in PDB 4onh: Crystal Structure of DN6 Tcr

The structure of Crystal Structure of DN6 Tcr, PDB code: 4onh was solved by S.Roy, E.J.Adams, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.67 / 3.01
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	143.825, 64.063, 69.534, 90.00, 115.88, 90.00
R / Rfree (%)	25.7 / 31.7

The binding sites of Chlorine atom in the Crystal Structure of DN6 Tcr (pdb code 4onh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of DN6 Tcr, PDB code: 4onh:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Crystal Structure of DN6 Tcr


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of DN6 Tcr within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl302 b:92.1 occ:1.00 N B:LEU157 3.3 60.8 1.0 CB B:LEU157 3.8 61.2 1.0 O B:LEU157 3.8 61.0 1.0 CA B:LEU157 4.0 61.0 1.0 C B:GLU156 4.3 74.6 1.0 CA B:GLU156 4.3 75.0 1.0 C B:LEU157 4.3 60.9 1.0 CG2 B:THR172 4.4 55.2 1.0 O B:VAL155 4.4 49.4 1.0 CD2 B:LEU190 4.6 79.9 1.0

Chlorine binding site 2 out of 3 in the Crystal Structure of DN6 Tcr


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of DN6 Tcr within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl303 b:86.1 occ:1.00 OG B:SER168 2.5 0.3 0.0 N B:SER168 2.9 0.7 1.0 N B:HIS167 3.0 92.2 1.0 CB B:SER168 3.5 0.5 0.0 CA B:SER168 3.5 0.0 1.0 C B:HIS167 3.7 95.6 1.0 CA B:VAL166 3.7 74.1 1.0 C B:VAL166 3.8 74.3 1.0 CA B:HIS167 3.8 93.4 1.0 CB B:VAL166 4.0 75.1 1.0 ND1 B:HIS167 4.1 92.5 1.0 CG1 B:VAL166 4.2 75.6 0.0 CB B:HIS167 4.2 93.3 1.0 CG B:HIS167 4.6 92.3 1.0 O B:HIS167 4.7 96.8 1.0 O B:GLU165 4.9 85.6 1.0 O B:VAL166 4.9 74.2 1.0

Chlorine binding site 3 out of 3 in the Crystal Structure of DN6 Tcr


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of DN6 Tcr within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl304 b:85.4 occ:1.00 O B:GLU134 2.9 0.9 1.0 C B:GLU134 3.2 0.6 1.0 N B:GLU134 3.5 0.6 1.0 N B:ILE135 3.5 0.9 1.0 CG1 B:ILE135 3.6 0.6 1.0 CA B:ILE135 3.6 0.5 1.0 C B:ALA133 3.9 89.8 1.0 CA B:ALA133 4.0 84.9 1.0 CA B:GLU134 4.0 0.4 1.0 CB B:ILE135 4.2 0.4 1.0 O B:ALA133 4.7 91.1 1.0 CD1 B:ILE135 4.8 0.2 1.0 C B:ILE135 4.9 0.1 1.0 CB B:ALA133 4.9 82.9 1.0 N B:ALA133 4.9 78.9 1.0 CB B:GLU134 5.0 0.5 1.0

S.Roy, D.Ly, N.S.Li, J.Altman, J.A.Piccirilli, D.B.Moody, E.J.Adams. The Molecular Basis of Mycobacterial Lipid Antigen Presentation By CD1C and Its Recognition By T Cells Proc.Natl.Acad.Sci.Usa 2014.
ISSN: ESSN 1091-6490