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Chlorine in PDB 4oze: A.Aolicus Lpxc in Complex with Native Product

Protein crystallography data

The structure of A.Aolicus Lpxc in Complex with Native Product, PDB code: 4oze was solved by N.B.Olivier, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 87.76 / 1.61
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 101.332, 101.332, 123.553, 90.00, 90.00, 120.00
R / Rfree (%) 16.2 / 18.5

Other elements in 4oze:

The structure of A.Aolicus Lpxc in Complex with Native Product also contains other interesting chemical elements:

Zinc (Zn) 7 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the A.Aolicus Lpxc in Complex with Native Product (pdb code 4oze). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the A.Aolicus Lpxc in Complex with Native Product, PDB code: 4oze:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4oze

Go back to Chlorine Binding Sites List in 4oze
Chlorine binding site 1 out of 2 in the A.Aolicus Lpxc in Complex with Native Product


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of A.Aolicus Lpxc in Complex with Native Product within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl305

b:27.4
occ:1.00
ZN A:ZN302 2.2 26.2 1.0
OD1 A:ASN57 3.4 32.6 0.6
NE2 A:HIS58 3.5 23.7 1.0
O A:HOH462 3.6 25.9 1.0
CD2 A:HIS58 3.6 25.2 1.0
NE2 A:HIS188 3.6 24.2 1.0
CB A:ASN57 3.9 25.0 0.5
CB A:ASN57 3.9 17.5 0.6
CG2 A:VAL192 4.0 21.3 1.0
OD1 A:ASN57 4.0 50.5 0.5
CG A:ASN57 4.1 34.9 0.6
CG1 A:VAL192 4.1 21.7 1.0
CE1 A:HIS188 4.2 24.9 1.0
CB A:VAL192 4.3 21.4 1.0
CG A:ASN57 4.3 52.6 0.5
CD2 A:HIS188 4.7 24.6 1.0
CE1 A:HIS58 4.8 23.3 1.0
CD1 A:LEU194 4.9 21.5 1.0
CG A:HIS58 4.9 23.3 1.0
O A:ASN57 4.9 25.3 0.5

Chlorine binding site 2 out of 2 in 4oze

Go back to Chlorine Binding Sites List in 4oze
Chlorine binding site 2 out of 2 in the A.Aolicus Lpxc in Complex with Native Product


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of A.Aolicus Lpxc in Complex with Native Product within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl304

b:27.1
occ:1.00
ZN B:ZN302 2.2 24.9 1.0
OD1 B:ASN57 3.4 28.1 0.5
NE2 B:HIS58 3.4 23.3 1.0
O B:HOH461 3.5 23.0 1.0
NE2 B:HIS188 3.6 24.4 1.0
CD2 B:HIS58 3.6 24.6 1.0
CB B:ASN57 3.8 25.3 0.5
CB B:ASN57 3.9 17.9 0.5
OD1 B:ASN57 3.9 51.4 0.5
CG2 B:VAL192 4.0 20.8 1.0
CG B:ASN57 4.0 33.5 0.5
CE1 B:HIS188 4.1 25.2 1.0
CG1 B:VAL192 4.1 21.6 1.0
CB B:VAL192 4.3 21.1 1.0
CG B:ASN57 4.3 54.4 0.5
CE1 B:HIS58 4.7 23.5 1.0
CD2 B:HIS188 4.7 25.1 1.0
CG B:HIS58 4.9 23.2 1.0
CD1 B:LEU194 4.9 19.3 1.0

Reference:

M.D.Miller, N.Gao, P.Ross, N.B.Olivier. Mechanistic Insight From the Crystal Structure of A.Aolicus Lpxc in the Presence of Product To Be Published.
Page generated: Fri Jul 11 20:16:17 2025

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