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Chlorine in PDB 4p4d: X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1C

Enzymatic activity of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1C

All present enzymatic activity of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1C:
3.4.17.21;

Protein crystallography data

The structure of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1C, PDB code: 4p4d was solved by C.Barinka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.63 / 1.65
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 101.902, 130.079, 159.667, 90.00, 90.00, 90.00
R / Rfree (%) 15.7 / 17.4

Other elements in 4p4d:

The structure of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1C also contains other interesting chemical elements:

Zinc (Zn) 2 atoms
Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1C (pdb code 4p4d). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1C, PDB code: 4p4d:

Chlorine binding site 1 out of 1 in 4p4d

Go back to Chlorine Binding Sites List in 4p4d
Chlorine binding site 1 out of 1 in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1C


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl819

b:21.5
occ:1.00
 O A:HOH1032 3.1 20.2 1.0
O A:HOH1508 3.1 21.0 0.7
ND2 A:ASN451 3.3 17.6 1.0
NE A:ARG534 3.3 26.9 1.0
N A:ASP453 3.3 18.8 1.0
NH1 A:ARG534 3.4 27.7 1.0
CB A:ARG534 3.8 18.2 1.0
CZ A:ARG534 3.9 29.3 1.0
CB A:ASP453 3.9 17.6 1.0
NH2 A:ARG580 3.9 18.6 1.0
CB A:ASN451 3.9 16.5 1.0
CA A:ASP453 4.0 17.8 1.0
CG A:ASN451 4.1 15.9 1.0
N A:ALA452 4.1 17.9 1.0
C A:ASN451 4.2 18.3 1.0
C A:ASP453 4.3 19.0 1.0
O A:ASP453 4.3 19.4 1.0
CA A:ALA452 4.3 18.1 1.0
C A:ALA452 4.3 18.0 1.0
O A:ASN451 4.4 19.2 1.0
CD A:ARG534 4.4 24.1 1.0
CG A:ARG534 4.5 20.4 1.0
CZ A:ARG580 4.7 20.4 1.0
O A:ALA535 4.7 20.5 1.0
CA A:ASN451 4.8 16.8 1.0
O A:SER454 4.8 20.3 0.8
CA A:ARG534 4.8 18.0 1.0
N A:ALA535 4.8 18.4 1.0
CD A:ARG536 4.9 28.3 0.7
O A:HOH1492 4.9 38.3 1.0

Reference:

C.Barinka, C.Barinka. N/A N/A.
Page generated: Fri Jul 11 20:19:29 2025

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