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Chlorine in PDB 4q34: Crystal Structure of A Putative Esterase (BDI_1566) From Parabacteroides Distasonis Atcc 8503 at 1.60 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Putative Esterase (BDI_1566) From Parabacteroides Distasonis Atcc 8503 at 1.60 A Resolution, PDB code: 4q34 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.66 / 1.60
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 59.327, 59.327, 209.591, 90.00, 90.00, 90.00
R / Rfree (%) 15.6 / 18.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Putative Esterase (BDI_1566) From Parabacteroides Distasonis Atcc 8503 at 1.60 A Resolution (pdb code 4q34). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of A Putative Esterase (BDI_1566) From Parabacteroides Distasonis Atcc 8503 at 1.60 A Resolution, PDB code: 4q34:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 4q34

Go back to Chlorine Binding Sites List in 4q34
Chlorine binding site 1 out of 3 in the Crystal Structure of A Putative Esterase (BDI_1566) From Parabacteroides Distasonis Atcc 8503 at 1.60 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Esterase (BDI_1566) From Parabacteroides Distasonis Atcc 8503 at 1.60 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:34.6
occ:1.00
O A:HOH577 3.1 29.5 1.0
NE2 A:GLN195 3.3 24.9 0.7
NE A:ARG133 3.3 36.3 1.0
NH2 A:ARG133 3.8 35.5 1.0
CZ2 A:TRP280 3.9 24.7 1.0
CZ3 A:TRP130 3.9 27.1 1.0
OG A:SER194 4.0 26.2 1.0
CZ A:ARG133 4.0 37.3 1.0
CG1 A:VAL73 4.1 21.3 1.0
CG A:ARG133 4.1 27.1 1.0
OE1 A:GLN195 4.1 17.9 0.7
CD A:GLN195 4.2 23.5 0.7
CH2 A:TRP280 4.2 23.9 1.0
CD A:ARG133 4.3 32.6 1.0
CE1 A:PHE134 4.4 22.6 1.0
NE2 A:HIS316 4.6 20.0 1.0
CH2 A:TRP130 4.6 28.9 1.0
CE3 A:TRP130 4.9 23.8 1.0

Chlorine binding site 2 out of 3 in 4q34

Go back to Chlorine Binding Sites List in 4q34
Chlorine binding site 2 out of 3 in the Crystal Structure of A Putative Esterase (BDI_1566) From Parabacteroides Distasonis Atcc 8503 at 1.60 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Esterase (BDI_1566) From Parabacteroides Distasonis Atcc 8503 at 1.60 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:45.5
occ:1.00
N A:ARG150 3.0 24.7 1.0
O A:HOH736 3.4 35.9 1.0
CB A:ARG150 3.6 31.0 0.5
CB A:ARG150 3.7 28.3 0.5
CG A:LYS149 3.7 31.1 1.0
CD A:ARG150 3.8 39.6 0.5
CG A:ARG150 3.8 28.4 0.5
CA A:LYS149 3.8 23.1 1.0
CA A:ARG150 3.9 26.6 0.5
CA A:ARG150 3.9 25.6 0.5
CG A:ARG150 3.9 33.2 0.5
C A:LYS149 3.9 23.1 1.0
CD A:ARG150 4.4 32.2 0.5
CB A:LYS149 4.4 25.0 1.0
O A:PHE148 4.6 22.8 1.0
C A:ARG150 4.6 24.7 1.0
N A:ASP151 4.8 22.8 1.0
CD A:LYS149 4.9 37.1 1.0
CE A:LYS149 4.9 46.5 1.0
NH1 A:ARG150 5.0 44.8 0.5
NE A:ARG150 5.0 44.4 0.5

Chlorine binding site 3 out of 3 in 4q34

Go back to Chlorine Binding Sites List in 4q34
Chlorine binding site 3 out of 3 in the Crystal Structure of A Putative Esterase (BDI_1566) From Parabacteroides Distasonis Atcc 8503 at 1.60 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Putative Esterase (BDI_1566) From Parabacteroides Distasonis Atcc 8503 at 1.60 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:36.1
occ:1.00
O A:HOH613 3.0 32.3 1.0
O A:HOH631 3.0 34.0 1.0
ND2 A:ASN132 3.2 25.1 1.0
NH1 A:ARG274 3.4 39.0 1.0
CB A:ARG274 3.9 35.3 1.0
CB A:ASN132 3.9 24.2 1.0
CG A:ARG274 3.9 36.0 1.0
CB A:GLU276 4.0 29.4 1.0
CD1 A:LEU277 4.0 27.6 1.0
CD A:ARG274 4.0 38.2 1.0
CG A:ASN132 4.1 25.1 1.0
CG A:GLU276 4.1 33.8 1.0
CZ A:ARG274 4.4 41.7 1.0
NE A:ARG274 4.7 37.5 1.0
CA A:ARG274 4.8 33.8 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 26 00:16:14 2024

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