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Chlorine in PDB 4q9v: Crystal Structure of TIPE3

Protein crystallography data

The structure of Crystal Structure of TIPE3, PDB code: 4q9v was solved by J.Wu, X.Zhang, Y.H.Chen, Y.Shi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.74 / 2.30
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 61.729, 87.296, 242.309, 90.00, 90.00, 90.00
R / Rfree (%) 24 / 26.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of TIPE3 (pdb code 4q9v). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of TIPE3, PDB code: 4q9v:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 4q9v

Go back to Chlorine Binding Sites List in 4q9v
Chlorine binding site 1 out of 5 in the Crystal Structure of TIPE3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of TIPE3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:98.4
occ:1.00
N A:LEU268 3.4 68.9 1.0
OG A:SER267 4.0 81.9 1.0
CA A:SER267 4.0 68.2 1.0
CB A:LEU268 4.1 82.3 1.0
CD1 A:LEU268 4.2 93.4 1.0
C A:SER267 4.2 63.8 1.0
CA A:LEU268 4.3 77.0 1.0
N A:ASP269 4.5 68.3 1.0
CB A:SER267 4.6 70.8 1.0
CG A:LEU268 4.7 90.3 1.0
C A:LEU268 4.9 71.4 1.0
OD2 A:ASP269 5.0 0.5 1.0

Chlorine binding site 2 out of 5 in 4q9v

Go back to Chlorine Binding Sites List in 4q9v
Chlorine binding site 2 out of 5 in the Crystal Structure of TIPE3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of TIPE3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:94.2
occ:1.00
OG A:SER263 4.5 51.4 1.0
CD A:ARG219 4.6 65.6 1.0
CE2 A:PHE217 4.6 53.7 1.0
CD2 A:PHE217 4.9 49.0 1.0

Chlorine binding site 3 out of 5 in 4q9v

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Chlorine binding site 3 out of 5 in the Crystal Structure of TIPE3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of TIPE3 within 5.0Å range:

Chlorine binding site 4 out of 5 in 4q9v

Go back to Chlorine Binding Sites List in 4q9v
Chlorine binding site 4 out of 5 in the Crystal Structure of TIPE3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of TIPE3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:83.4
occ:1.00
N A:GLN187 3.7 44.6 1.0
CA A:SER186 4.0 39.9 1.0
CB A:SER186 4.1 37.5 1.0
O A:HOH431 4.3 56.0 1.0
C A:SER186 4.3 39.5 1.0
CB A:GLN187 4.4 50.2 1.0
CA A:GLN187 4.7 48.2 1.0

Chlorine binding site 5 out of 5 in 4q9v

Go back to Chlorine Binding Sites List in 4q9v
Chlorine binding site 5 out of 5 in the Crystal Structure of TIPE3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of TIPE3 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:95.9
occ:1.00
OG1 B:THR242 3.1 90.5 1.0
CB B:ARG244 3.4 0.7 1.0
N B:ARG244 3.9 0.1 1.0
CD B:ARG244 4.0 0.5 1.0
CA B:ARG244 4.1 0.6 1.0
CG B:ARG244 4.2 1.0 1.0
NE B:ARG248 4.2 0.0 1.0
NH2 B:ARG248 4.3 0.8 1.0
CB B:THR242 4.4 83.5 1.0
N B:THR245 4.6 94.9 1.0
C B:ARG244 4.7 0.6 1.0
CG2 B:THR245 4.7 53.9 1.0
CZ B:ARG248 4.7 0.5 1.0

Reference:

S.A.Fayngerts, J.Wu, C.L.Oxley, X.Liu, A.Vourekas, T.Cathopoulis, Z.Wang, J.Cui, S.Liu, H.Sun, M.A.Lemmon, L.Zhang, Y.Shi, Y.H.Chen. TIPE3 Is the Transfer Protein of Lipid Second Messengers That Promote Cancer. Cancer Cell V. 26 465 2014.
ISSN: ISSN 1535-6108
PubMed: 25242044
DOI: 10.1016/J.CCR.2014.07.025
Page generated: Fri Jul 26 00:23:57 2024

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