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Chlorine in PDB 4qpg: Crystal Structure of Empty Hepatitis A Virus

Protein crystallography data

The structure of Crystal Structure of Empty Hepatitis A Virus, PDB code: 4qpg was solved by X.Wang, J.Ren, Q.Gao, Z.Hu, Y.Sun, X.Li, D.J.Rowlands, W.Yin, J.Wang, D.I.Stuart, Z.Rao, E.E.Fry, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.67 / 3.50
Space group P 21 21 2 2
Cell size a, b, c (Å), α, β, γ (°) 366.114, 442.914, 289.023, 90.00, 90.00, 90.00
R / Rfree (%) 26.4 / 26.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Empty Hepatitis A Virus (pdb code 4qpg). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Empty Hepatitis A Virus, PDB code: 4qpg:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4qpg

Go back to Chlorine Binding Sites List in 4qpg
Chlorine binding site 1 out of 2 in the Crystal Structure of Empty Hepatitis A Virus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Empty Hepatitis A Virus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:1.0
occ:0.20
NH2 A:ARG193 2.3 0.9 1.0
CZ A:ARG193 3.5 0.5 1.0
NH1 A:ARG193 3.9 0.6 1.0
NE A:ARG193 4.6 0.4 1.0
CD A:ARG193 5.0 0.4 1.0

Chlorine binding site 2 out of 2 in 4qpg

Go back to Chlorine Binding Sites List in 4qpg
Chlorine binding site 2 out of 2 in the Crystal Structure of Empty Hepatitis A Virus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Empty Hepatitis A Virus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:0.1
occ:0.20
NH1 A:ARG193 3.1 0.6 1.0
CZ A:ARG193 4.4 0.5 1.0
NH2 A:ARG193 5.0 0.9 1.0

Reference:

X.Wang, J.Ren, Q.Gao, Z.Hu, Y.Sun, X.Li, D.J.Rowlands, W.Yin, J.Wang, D.I.Stuart, Z.Rao, E.E.Fry. Hepatitis A Virus and the Origins of Picornaviruses. Nature 2014.
ISSN: ESSN 1476-4687
PubMed: 25327248
DOI: 10.1038/NATURE13806
Page generated: Fri Jul 11 20:57:03 2025

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