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Chlorine in PDB 4rgh: Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role

Protein crystallography data

The structure of Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role, PDB code: 4rgh was solved by J.Brynda, K.Grantz Saskova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.44 / 1.90
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 66.870, 86.400, 52.120, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 25.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role (pdb code 4rgh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role, PDB code: 4rgh:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4rgh

Go back to Chlorine Binding Sites List in 4rgh
Chlorine binding site 1 out of 2 in the Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:44.3
occ:1.00
NE A:ARG261 2.9 23.9 1.0
ND1 A:HIS263 2.9 19.6 1.0
NH2 A:ARG261 3.5 23.1 1.0
CZ A:ARG261 3.6 23.6 1.0
CE1 A:HIS263 3.7 20.2 1.0
CG A:ARG261 3.8 24.6 1.0
CD A:ARG261 3.9 24.0 1.0
CG A:HIS263 4.0 19.9 1.0
CA A:HIS263 4.1 21.2 1.0
OG A:SER277 4.2 24.8 1.0
CB A:SER277 4.2 22.5 1.0
CB A:HIS263 4.3 21.3 1.0
CH2 A:TRP246 4.6 34.4 1.0
O A:HIS263 4.7 21.2 1.0
O A:VAL262 4.7 19.6 1.0
CZ2 A:TRP246 4.7 32.9 1.0
N A:HIS263 4.9 21.6 1.0
C A:HIS263 4.9 22.4 1.0
NH1 A:ARG261 4.9 22.2 1.0
NE2 A:HIS263 4.9 22.1 1.0
CZ3 A:TRP246 5.0 33.0 1.0

Chlorine binding site 2 out of 2 in 4rgh

Go back to Chlorine Binding Sites List in 4rgh
Chlorine binding site 2 out of 2 in the Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl401

b:24.9
occ:1.00
NH1 B:ARG235 3.1 22.9 1.0
ND1 B:HIS213 3.1 20.0 1.0
CG B:ARG235 3.7 21.4 1.0
CD B:ARG235 3.8 21.0 1.0
CB B:HIS213 3.9 21.1 1.0
CG B:HIS213 3.9 20.3 1.0
CD B:PRO214 4.1 19.8 1.0
CE1 B:HIS213 4.2 18.9 1.0
CZ B:ARG235 4.2 22.2 1.0
CA B:HIS213 4.4 18.9 1.0
NE B:ARG235 4.5 22.8 1.0
O B:ARG235 4.6 21.7 1.0
CG B:PRO214 4.7 20.0 1.0
N B:PRO214 4.8 18.8 1.0
C B:HIS213 5.0 19.1 1.0

Reference:

M.Siva, M.Svoboda, V.Veverka, J.Brynda, J.-F.Trempe, M.Kozisek, I.Fleisigova, J.Belza, J.Konvalinka, K.Grantz Saskova. Human Dna Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering Its Cellular Role To Be Published.
Page generated: Fri Jul 26 01:14:07 2024

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