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Chlorine in PDB 4rk2: Crystal Structure of Sugar Transporter RHE_PF00321 From Rhizobium Etli, Target Efi-510806, An Open Conformation

Protein crystallography data

The structure of Crystal Structure of Sugar Transporter RHE_PF00321 From Rhizobium Etli, Target Efi-510806, An Open Conformation, PDB code: 4rk2 was solved by Y.Patskovsky, R.Toro, R.Bhosle, N.Al Obaidi, S.Chamala, J.D.Attonito, A.Scott Glenn, S.Chowdhury, J.Lafleur, R.D.Siedel, B.Hillerich, J.Love, K.L.Whalen, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 51.995, 110.520, 137.276, 90.00, 90.00, 90.00
R / Rfree (%) 18.3 / 24.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Sugar Transporter RHE_PF00321 From Rhizobium Etli, Target Efi-510806, An Open Conformation (pdb code 4rk2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Sugar Transporter RHE_PF00321 From Rhizobium Etli, Target Efi-510806, An Open Conformation, PDB code: 4rk2:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4rk2

Go back to Chlorine Binding Sites List in 4rk2
Chlorine binding site 1 out of 2 in the Crystal Structure of Sugar Transporter RHE_PF00321 From Rhizobium Etli, Target Efi-510806, An Open Conformation


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Sugar Transporter RHE_PF00321 From Rhizobium Etli, Target Efi-510806, An Open Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:50.7
occ:1.00
N A:ILE308 3.2 31.6 1.0
N A:VAL97 3.4 30.3 1.0
O A:HOH624 3.5 35.9 1.0
CA A:GLN307 3.6 32.2 1.0
O A:ILE308 3.7 38.2 1.0
CG2 A:VAL97 3.7 40.2 1.0
CB A:ASP96 3.8 35.3 1.0
CB A:GLN307 3.8 33.8 1.0
CA A:ASP96 3.8 35.0 1.0
C A:GLN307 3.9 38.4 1.0
O A:HOH753 4.0 50.2 1.0
C A:ASP96 4.1 33.3 1.0
CG1 A:ILE308 4.2 38.2 1.0
CG A:GLN307 4.2 37.3 1.0
CA A:ILE308 4.3 30.1 1.0
CB A:VAL97 4.3 35.3 1.0
C A:ILE308 4.4 32.8 1.0
CA A:VAL97 4.4 30.1 1.0
CB A:ILE308 4.8 33.3 1.0
OE1 A:GLN307 5.0 48.1 1.0
N A:GLN307 5.0 27.0 1.0

Chlorine binding site 2 out of 2 in 4rk2

Go back to Chlorine Binding Sites List in 4rk2
Chlorine binding site 2 out of 2 in the Crystal Structure of Sugar Transporter RHE_PF00321 From Rhizobium Etli, Target Efi-510806, An Open Conformation


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Sugar Transporter RHE_PF00321 From Rhizobium Etli, Target Efi-510806, An Open Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:58.5
occ:1.00
O A:HOH892 3.3 59.2 1.0
N A:ALA173 3.4 45.2 1.0
N A:TRP172 3.5 36.8 1.0
CB A:TRP172 3.8 44.7 1.0
CA A:TRP172 4.0 39.4 1.0
CB A:THR171 4.0 38.1 1.0
N A:ASP297 4.1 45.2 1.0
C A:TRP172 4.1 47.8 1.0
CB A:ALA173 4.1 48.5 1.0
CA A:PRO296 4.2 47.0 1.0
CA A:ALA173 4.3 44.7 1.0
O A:HIS295 4.4 42.8 1.0
C A:THR171 4.4 33.5 1.0
OG1 A:THR171 4.5 39.6 1.0
C A:PRO296 4.6 49.1 1.0
CA A:THR171 4.7 34.2 1.0
CH2 A:TRP226 4.7 42.4 1.0
CG A:TRP172 4.9 42.4 1.0
CG2 A:THR171 4.9 43.0 1.0

Reference:

Y.Patskovsky, R.Toro, R.Bhosle, N.Al Obaidi, S.Chamala, A.Scott Glenn, J.D.Attonito, S.Chowdhury, J.Lafleur, R.D.Siedel, B.Hillerich, J.Love, K.L.Whalen, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi). Crystal Structure of Sugar Transporter RHE_PF00321 From Rhizobium Etli, Target Efi-510806 To Be Published.
Page generated: Fri Jul 11 21:23:50 2025

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