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Chlorine in PDB 4u6y: Crystal Structure of Hla-A*0201 in Complex with Flndk, A 15 Mer Self- Peptide

Protein crystallography data

The structure of Crystal Structure of Hla-A*0201 in Complex with Flndk, A 15 Mer Self- Peptide, PDB code: 4u6y was solved by S.Gras, E.Chabrol, J.Rossjohn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.44 / 1.47
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 50.884, 79.766, 54.840, 90.00, 111.75, 90.00
R / Rfree (%) 14.9 / 18.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Hla-A*0201 in Complex with Flndk, A 15 Mer Self- Peptide (pdb code 4u6y). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Hla-A*0201 in Complex with Flndk, A 15 Mer Self- Peptide, PDB code: 4u6y:

Chlorine binding site 1 out of 1 in 4u6y

Go back to Chlorine Binding Sites List in 4u6y
Chlorine binding site 1 out of 1 in the Crystal Structure of Hla-A*0201 in Complex with Flndk, A 15 Mer Self- Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Hla-A*0201 in Complex with Flndk, A 15 Mer Self- Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:31.2
occ:1.00
N A:GLY16 3.1 18.4 1.0
CA A:GLY16 3.5 17.5 1.0
C A:ARG14 3.6 18.4 1.0
CB A:ARG14 3.6 21.0 1.0
N A:ARG17 3.6 16.3 1.0
CA A:ARG14 3.8 17.5 1.0
N A:PRO15 3.9 19.1 1.0
O A:ARG14 3.9 19.1 1.0
C A:GLY16 4.0 16.5 1.0
CD A:PRO15 4.2 19.9 1.0
C A:PRO15 4.3 20.1 1.0
O A:ARG17 4.3 13.6 1.0
CD A:ARG14 4.4 32.0 1.0
CG A:ARG14 4.6 26.5 1.0
CA A:PRO15 4.7 20.0 1.0
CA A:ARG17 4.8 14.3 1.0
CG A:PRO15 4.8 20.8 1.0
C A:ARG17 5.0 13.0 1.0

Reference:

C.Hassan, E.Chabrol, L.Jahn, M.G.D.Kester, A.H.De Ru, J.W.Drijfhout, J.Rossjohn, J.H.F.Falkenburg, M.H.M.Heemskerk, S.Gras, P.A.Van Veelen. Naturally Processed Non-Canonical Hla-A*02:01 Presented Peptides J.Biol.Chem. 2014.
ISSN: ESSN 1083-351X
DOI: 10.1074/JBC.M114.607028
Page generated: Fri Jul 26 02:07:29 2024

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