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Chlorine in PDB 4w8o: Structure of the Luciferase-Like Enzyme From the Nonluminescent Zophobas Morio Mealworm

Protein crystallography data

The structure of Structure of the Luciferase-Like Enzyme From the Nonluminescent Zophobas Morio Mealworm, PDB code: 4w8o was solved by C.R.Santos, R.A.Prado, V.Viviani, M.T.Murakami, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.11 / 2.05
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 87.774, 91.005, 110.294, 90.00, 90.00, 90.00
R / Rfree (%) 18.8 / 23.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Luciferase-Like Enzyme From the Nonluminescent Zophobas Morio Mealworm (pdb code 4w8o). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of the Luciferase-Like Enzyme From the Nonluminescent Zophobas Morio Mealworm, PDB code: 4w8o:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4w8o

Go back to Chlorine Binding Sites List in 4w8o
Chlorine binding site 1 out of 2 in the Structure of the Luciferase-Like Enzyme From the Nonluminescent Zophobas Morio Mealworm


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Luciferase-Like Enzyme From the Nonluminescent Zophobas Morio Mealworm within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:29.3
occ:1.00
N A:ALA194 3.2 29.4 1.0
ND2 A:ASN391 3.3 33.7 1.0
N A:ARG390 3.4 35.0 1.0
N A:ASN391 3.5 34.6 1.0
N A:TYR389 3.7 31.4 1.0
CB A:ASN391 3.7 33.4 1.0
CB A:ALA194 3.8 28.0 1.0
CB A:TYR388 3.9 31.6 1.0
CG A:ASN391 3.9 33.8 1.0
CA A:ALA194 4.0 28.3 1.0
CB A:LYS193 4.0 33.9 1.0
CD2 A:LEU115 4.1 33.6 1.0
CA A:LYS193 4.1 32.1 1.0
O A:ALA194 4.1 27.5 1.0
C A:LYS193 4.1 30.4 1.0
CB A:TYR389 4.1 30.9 1.0
CA A:ARG390 4.2 37.0 1.0
C A:ARG390 4.2 36.2 1.0
CA A:ASN391 4.2 33.6 1.0
CA A:TYR389 4.2 31.7 1.0
C A:TYR389 4.3 34.6 1.0
C A:TYR388 4.4 31.3 1.0
C A:ALA194 4.5 27.8 1.0
CB A:ARG390 4.6 40.5 1.0
CA A:TYR388 4.6 30.9 1.0
CG A:TYR388 4.6 31.3 1.0
CG A:LYS193 4.7 36.5 1.0
CB A:LEU115 4.9 31.3 1.0
CG A:LEU115 4.9 32.3 1.0

Chlorine binding site 2 out of 2 in 4w8o

Go back to Chlorine Binding Sites List in 4w8o
Chlorine binding site 2 out of 2 in the Structure of the Luciferase-Like Enzyme From the Nonluminescent Zophobas Morio Mealworm


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of the Luciferase-Like Enzyme From the Nonluminescent Zophobas Morio Mealworm within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl502

b:34.8
occ:1.00
N B:ARG390 3.1 42.7 1.0
N B:ALA194 3.1 33.4 1.0
ND2 B:ASN391 3.2 49.8 1.0
CB B:ARG390 3.6 47.3 1.0
N B:ASN391 3.6 46.5 1.0
CB B:TYR388 3.7 36.6 1.0
N B:TYR389 3.7 36.5 1.0
CA B:ARG390 3.7 46.0 1.0
CB B:LYS193 3.9 39.0 1.0
CA B:LYS193 3.9 37.6 1.0
CB B:ALA194 4.0 32.0 1.0
CA B:ALA194 4.0 32.0 1.0
C B:LYS193 4.0 35.2 1.0
CG B:ARG390 4.0 47.5 1.0
CD2 B:LEU115 4.1 35.6 1.0
C B:ARG390 4.1 47.0 1.0
O B:ALA194 4.1 31.0 1.0
CG B:ASN391 4.1 49.9 1.0
C B:TYR389 4.1 40.5 1.0
CB B:ASN391 4.2 48.1 1.0
CA B:TYR389 4.3 37.8 1.0
CB B:TYR389 4.3 36.5 1.0
C B:TYR388 4.4 36.6 1.0
C B:ALA194 4.4 31.1 1.0
CG B:TYR388 4.5 36.8 1.0
CA B:TYR388 4.5 35.2 1.0
CA B:ASN391 4.6 48.0 1.0
CG B:LYS193 4.6 42.1 1.0
CD1 B:LEU115 4.7 33.9 1.0
CG B:LEU115 4.8 33.4 1.0
CD1 B:TYR388 4.8 35.5 1.0
CB B:LEU115 5.0 32.4 1.0

Reference:

C.R.Santos, R.A.Prado, V.Viviani, M.T.Murakami. Structure of the Luciferase-Like Enzyme From the Nonluminescent Zophobas Morio Mealworm To Be Published.
Page generated: Fri Jul 26 02:43:04 2024

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