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Chlorine in PDB 4ybr: Structure of Mycobacterium Tuberculosis Nadd in Complex with Nadp, P21212

Enzymatic activity of Structure of Mycobacterium Tuberculosis Nadd in Complex with Nadp, P21212

All present enzymatic activity of Structure of Mycobacterium Tuberculosis Nadd in Complex with Nadp, P21212:
2.7.7.18;

Protein crystallography data

The structure of Structure of Mycobacterium Tuberculosis Nadd in Complex with Nadp, P21212, PDB code: 4ybr was solved by K.V.Korotkov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 70.71 / 1.65
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 49.040, 141.430, 63.170, 90.00, 90.00, 90.00
R / Rfree (%) 19 / 21.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Mycobacterium Tuberculosis Nadd in Complex with Nadp, P21212 (pdb code 4ybr). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Mycobacterium Tuberculosis Nadd in Complex with Nadp, P21212, PDB code: 4ybr:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4ybr

Go back to Chlorine Binding Sites List in 4ybr
Chlorine binding site 1 out of 2 in the Structure of Mycobacterium Tuberculosis Nadd in Complex with Nadp, P21212


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Mycobacterium Tuberculosis Nadd in Complex with Nadp, P21212 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl304

b:52.2
occ:1.00
O B:HOH541 3.4 34.7 1.0
N B:GLY82 3.7 29.0 1.0
O B:HOH577 4.0 43.0 1.0
O B:HOH441 4.1 30.1 1.0
CH2 B:TRP45 4.2 25.9 1.0
O B:HOH478 4.3 38.1 1.0
CA B:GLY81 4.3 28.8 1.0
O B:HOH534 4.4 37.9 1.0
C B:GLY81 4.5 29.9 1.0
CA B:GLY82 4.6 28.8 1.0
CZ3 B:TRP45 4.9 25.9 1.0
O B:GLY82 4.9 25.0 1.0

Chlorine binding site 2 out of 2 in 4ybr

Go back to Chlorine Binding Sites List in 4ybr
Chlorine binding site 2 out of 2 in the Structure of Mycobacterium Tuberculosis Nadd in Complex with Nadp, P21212


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Mycobacterium Tuberculosis Nadd in Complex with Nadp, P21212 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl305

b:57.2
occ:1.00
OG B:SER100 3.4 27.8 1.0
N B:ASP99 3.5 29.5 1.0
C B:HIS97 3.7 27.4 1.0
NE B:ARG4 3.7 50.2 1.0
CA B:HIS97 3.7 28.0 1.0
CB B:ASP99 3.9 33.1 1.0
N B:SER100 3.9 24.8 1.0
O B:HIS97 4.0 25.0 1.0
CB B:HIS97 4.0 28.6 1.0
CA B:ASP99 4.0 30.4 1.0
N B:PRO98 4.0 28.8 1.0
CD B:ARG4 4.0 44.4 1.0
C B:ASP99 4.1 28.2 1.0
CD B:PRO98 4.3 29.9 1.0
CB B:SER100 4.4 25.9 1.0
C B:PRO98 4.6 28.8 1.0
CA B:SER100 4.7 24.3 1.0
CG B:ASP99 4.7 36.8 1.0
CZ B:ARG4 4.8 54.7 1.0
ND1 B:HIS97 4.8 30.1 1.0
OD2 B:ASP99 4.8 42.7 1.0
CA B:PRO98 4.9 29.1 1.0
CG B:HIS97 4.9 29.1 1.0
NH2 B:ARG4 5.0 57.9 1.0
CG B:ARG4 5.0 38.1 1.0
O B:ASP99 5.0 27.8 1.0

Reference:

K.V.Korotkov, K.V.Korotkov. N/A N/A.
Page generated: Fri Jul 26 04:00:14 2024

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