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Chlorine in PDB 4yyc: Crystal Structure of Trimethylamine Methyltransferase From Sinorhizobium Meliloti in Complex with Unknown Ligand

Protein crystallography data

The structure of Crystal Structure of Trimethylamine Methyltransferase From Sinorhizobium Meliloti in Complex with Unknown Ligand, PDB code: 4yyc was solved by I.G.Shabalin, P.J.Porebski, O.A.Gasiorowska, K.B.Handing, E.Niedzialkowska, M.T.Cymborowski, D.R.Cooper, M.Stead, J.Hammonds, M.Ahmed, J.Bonanno, R.Seidel, S.C.Almo, W.Minor, New York Structuralgenomics Research Consortium (Nysgrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.56
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 89.162, 60.025, 88.345, 90.00, 90.00, 90.00
R / Rfree (%) 13.9 / 16.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Trimethylamine Methyltransferase From Sinorhizobium Meliloti in Complex with Unknown Ligand (pdb code 4yyc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Trimethylamine Methyltransferase From Sinorhizobium Meliloti in Complex with Unknown Ligand, PDB code: 4yyc:

Chlorine binding site 1 out of 1 in 4yyc

Go back to Chlorine Binding Sites List in 4yyc
Chlorine binding site 1 out of 1 in the Crystal Structure of Trimethylamine Methyltransferase From Sinorhizobium Meliloti in Complex with Unknown Ligand


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Trimethylamine Methyltransferase From Sinorhizobium Meliloti in Complex with Unknown Ligand within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl602

b:32.9
occ:1.00
NZ A:LYS516 3.1 21.7 1.0
O A:HOH982 3.2 28.2 1.0
CE A:LYS516 3.8 21.6 1.0
CD A:LYS516 3.9 22.4 1.0
CG2 A:ILE186 4.0 20.5 1.0
CD A:LYS190 4.4 29.4 1.0
OD2 A:ASP194 4.8 21.9 1.0
CB A:LYS190 4.9 24.1 1.0

Reference:

E.Niedzialkowska, O.A.Gasiorowska, K.B.Handing, P.J.Porebski, I.G.Shabalin, M.T.Cymborowski, W.Minor. Crystallization and Purification Artifacts in Macromolecular Crystallography: the Tale Usually Not Told To Be Published.
Page generated: Fri Jul 11 23:31:35 2025

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