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Chlorine in PDB 4z0p: Crystal Structure of Nadp-Dependent Dehydrogenase From Sinorhizobium Meliloti in Complex with Nadph and Oxalate

Protein crystallography data

The structure of Crystal Structure of Nadp-Dependent Dehydrogenase From Sinorhizobium Meliloti in Complex with Nadph and Oxalate, PDB code: 4z0p was solved by P.Sroka, O.A.Gasiorowska, K.B.Handing, I.G.Shabalin, P.J.Porebski, B.Shillerich, J.Bonanno, S.C.Almo, W.Minor, New York Structural Genomicsresearch Consortium (Nysgrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.70
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 108.099, 108.099, 80.226, 90.00, 90.00, 120.00
R / Rfree (%) 13.4 / 15

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Nadp-Dependent Dehydrogenase From Sinorhizobium Meliloti in Complex with Nadph and Oxalate (pdb code 4z0p). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Nadp-Dependent Dehydrogenase From Sinorhizobium Meliloti in Complex with Nadph and Oxalate, PDB code: 4z0p:

Chlorine binding site 1 out of 1 in 4z0p

Go back to Chlorine Binding Sites List in 4z0p
Chlorine binding site 1 out of 1 in the Crystal Structure of Nadp-Dependent Dehydrogenase From Sinorhizobium Meliloti in Complex with Nadph and Oxalate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Nadp-Dependent Dehydrogenase From Sinorhizobium Meliloti in Complex with Nadph and Oxalate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:41.4
occ:1.00
O A:HOH550 2.9 43.0 1.0
N A:ASN276 3.0 24.9 1.0
CA A:ASN276 3.5 24.4 1.0
CB A:ASN276 3.5 33.2 1.0
CD A:PRO275 3.7 37.1 1.0
C A:ASN276 3.7 26.1 1.0
CB A:MET274 3.8 22.9 0.3
CE A:MET274 3.8 25.6 0.3
N A:PRO275 3.8 32.3 1.0
CB A:MET274 3.8 29.8 0.7
CG2 A:VAL277 3.9 25.4 1.0
O A:HOH801 3.9 48.4 1.0
CE A:MET274 4.0 47.1 0.7
CG A:PRO275 4.0 44.4 1.0
N A:VAL277 4.0 20.4 1.0
C A:PRO275 4.1 34.5 1.0
CD2 A:LEU247 4.1 23.5 1.0
C A:MET274 4.1 30.6 1.0
ND2 A:ASN276 4.3 42.5 1.0
O A:ASN276 4.3 25.3 1.0
CG A:ASN276 4.4 65.4 1.0
CB A:LEU247 4.4 22.4 1.0
CA A:PRO275 4.4 38.7 1.0
CA A:MET274 4.4 26.5 0.3
CA A:MET274 4.5 30.7 0.7
CG A:LEU247 4.6 22.1 1.0
CD1 A:LEU247 4.6 23.3 1.0
CG A:MET274 4.6 23.5 0.3
O A:MET274 4.6 27.8 1.0
CG A:MET274 4.6 41.9 0.7
CB A:PRO275 4.8 43.2 1.0
O A:HOH557 4.8 25.7 1.0
O A:HOH902 4.8 63.1 1.0
SD A:MET274 4.8 29.2 0.3
CB A:VAL277 4.9 22.2 1.0
SD A:MET274 5.0 35.5 0.7
CA A:VAL277 5.0 20.6 1.0

Reference:

P.Sroka, O.A.Gasiorowska, K.B.Handing, I.G.Shabalin, W.Minor. Crystal Structure of Nadp-Dependent Dehydrogenase From Sinorhizobium Meliloti To Be Published.
Page generated: Fri Jul 11 23:32:14 2025

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