Chlorine in PDB 4zys: Crystal Structure of An Exotoxin 6 (SAV0422) From Staphylococcus Aureus Subsp. Aureus MU50 at 2.25 A Resolution
Protein crystallography data
The structure of Crystal Structure of An Exotoxin 6 (SAV0422) From Staphylococcus Aureus Subsp. Aureus MU50 at 2.25 A Resolution, PDB code: 4zys
was solved by
Joint Center For Structural Genomics (Jcsg),
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
29.33 /
2.25
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
63.120,
64.020,
98.980,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
19.1 /
24
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of An Exotoxin 6 (SAV0422) From Staphylococcus Aureus Subsp. Aureus MU50 at 2.25 A Resolution
(pdb code 4zys). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the
Crystal Structure of An Exotoxin 6 (SAV0422) From Staphylococcus Aureus Subsp. Aureus MU50 at 2.25 A Resolution, PDB code: 4zys:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
Chlorine binding site 1 out
of 5 in 4zys
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Chlorine Binding Sites List in 4zys
Chlorine binding site 1 out
of 5 in the Crystal Structure of An Exotoxin 6 (SAV0422) From Staphylococcus Aureus Subsp. Aureus MU50 at 2.25 A Resolution
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of An Exotoxin 6 (SAV0422) From Staphylococcus Aureus Subsp. Aureus MU50 at 2.25 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl301
b:64.3
occ:1.00
|
NH2
|
A:ARG208
|
3.1
|
19.3
|
1.0
|
ND1
|
A:HIS196
|
3.2
|
26.7
|
1.0
|
NE
|
A:ARG208
|
3.6
|
30.5
|
1.0
|
CZ
|
A:ARG208
|
3.7
|
38.4
|
1.0
|
O
|
A:HOH495
|
3.8
|
25.0
|
1.0
|
CD1
|
A:LEU159
|
3.9
|
18.7
|
1.0
|
CE1
|
A:HIS196
|
4.1
|
26.7
|
1.0
|
CG
|
A:HIS196
|
4.1
|
25.0
|
1.0
|
CB
|
A:HIS196
|
4.2
|
21.9
|
1.0
|
CA
|
A:HIS196
|
4.5
|
22.6
|
1.0
|
CD
|
A:ARG208
|
4.8
|
24.1
|
1.0
|
|
Chlorine binding site 2 out
of 5 in 4zys
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Chlorine Binding Sites List in 4zys
Chlorine binding site 2 out
of 5 in the Crystal Structure of An Exotoxin 6 (SAV0422) From Staphylococcus Aureus Subsp. Aureus MU50 at 2.25 A Resolution
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of An Exotoxin 6 (SAV0422) From Staphylococcus Aureus Subsp. Aureus MU50 at 2.25 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl302
b:49.3
occ:1.00
|
O
|
A:HOH446
|
2.9
|
22.6
|
1.0
|
N
|
A:LYS206
|
3.2
|
19.9
|
1.0
|
O
|
A:HOH512
|
3.4
|
55.9
|
1.0
|
CL
|
A:CL303
|
3.5
|
57.2
|
1.0
|
CA
|
A:GLU205
|
3.7
|
17.9
|
1.0
|
CG
|
A:LYS206
|
3.9
|
23.5
|
1.0
|
CB
|
A:LYS206
|
3.9
|
23.2
|
1.0
|
C
|
A:GLU205
|
4.0
|
21.7
|
1.0
|
CA
|
A:LYS206
|
4.2
|
20.4
|
1.0
|
CB
|
A:GLU205
|
4.4
|
18.8
|
1.0
|
CD
|
A:LYS206
|
4.4
|
31.8
|
1.0
|
CE
|
A:LYS206
|
4.6
|
55.5
|
1.0
|
O
|
A:LEU204
|
4.6
|
23.9
|
1.0
|
CG
|
A:GLU205
|
4.8
|
26.9
|
1.0
|
N
|
A:GLU205
|
4.8
|
19.0
|
1.0
|
|
Chlorine binding site 3 out
of 5 in 4zys
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Chlorine Binding Sites List in 4zys
Chlorine binding site 3 out
of 5 in the Crystal Structure of An Exotoxin 6 (SAV0422) From Staphylococcus Aureus Subsp. Aureus MU50 at 2.25 A Resolution
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of An Exotoxin 6 (SAV0422) From Staphylococcus Aureus Subsp. Aureus MU50 at 2.25 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl303
b:57.2
occ:1.00
|
N
|
A:GLU207
|
3.3
|
23.5
|
1.0
|
CG
|
A:GLU207
|
3.4
|
38.5
|
1.0
|
CL
|
A:CL302
|
3.5
|
49.3
|
1.0
|
N
|
A:LYS206
|
3.6
|
19.9
|
1.0
|
CB
|
A:LYS206
|
3.8
|
23.2
|
1.0
|
CB
|
A:GLU207
|
3.8
|
26.0
|
1.0
|
CA
|
A:LYS206
|
4.0
|
20.4
|
1.0
|
C
|
A:LYS206
|
4.1
|
25.1
|
1.0
|
CA
|
A:GLU207
|
4.2
|
24.0
|
1.0
|
C
|
A:GLU205
|
4.3
|
21.7
|
1.0
|
CB
|
A:GLU205
|
4.4
|
18.8
|
1.0
|
CA
|
A:GLU205
|
4.6
|
17.9
|
1.0
|
CD
|
A:GLU207
|
4.7
|
70.0
|
1.0
|
CG
|
A:LYS206
|
4.9
|
23.5
|
1.0
|
OE2
|
A:GLU207
|
5.0
|
63.5
|
1.0
|
|
Chlorine binding site 4 out
of 5 in 4zys
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Chlorine Binding Sites List in 4zys
Chlorine binding site 4 out
of 5 in the Crystal Structure of An Exotoxin 6 (SAV0422) From Staphylococcus Aureus Subsp. Aureus MU50 at 2.25 A Resolution
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of An Exotoxin 6 (SAV0422) From Staphylococcus Aureus Subsp. Aureus MU50 at 2.25 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl301
b:64.4
occ:1.00
|
O
|
B:HOH402
|
2.9
|
52.7
|
1.0
|
ND1
|
B:HIS196
|
3.0
|
29.3
|
1.0
|
NH2
|
B:ARG208
|
3.1
|
28.8
|
1.0
|
O
|
B:HOH516
|
3.4
|
37.3
|
1.0
|
O
|
B:HOH500
|
3.4
|
55.2
|
1.0
|
O
|
B:HOH493
|
3.6
|
27.7
|
1.0
|
NE
|
B:ARG208
|
3.8
|
30.2
|
1.0
|
CZ
|
B:ARG208
|
3.8
|
33.9
|
1.0
|
CG
|
B:HIS196
|
3.9
|
27.4
|
1.0
|
CD1
|
B:LEU159
|
3.9
|
22.1
|
1.0
|
CE1
|
B:HIS196
|
4.0
|
28.9
|
1.0
|
CB
|
B:HIS196
|
4.0
|
24.0
|
1.0
|
CA
|
B:HIS196
|
4.3
|
24.2
|
1.0
|
O
|
B:HOH514
|
4.6
|
37.7
|
1.0
|
|
Chlorine binding site 5 out
of 5 in 4zys
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Chlorine Binding Sites List in 4zys
Chlorine binding site 5 out
of 5 in the Crystal Structure of An Exotoxin 6 (SAV0422) From Staphylococcus Aureus Subsp. Aureus MU50 at 2.25 A Resolution
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of An Exotoxin 6 (SAV0422) From Staphylococcus Aureus Subsp. Aureus MU50 at 2.25 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl302
b:65.8
occ:1.00
|
O
|
B:HOH504
|
3.0
|
38.1
|
1.0
|
N
|
B:LYS206
|
3.2
|
23.9
|
1.0
|
CA
|
B:GLU205
|
3.6
|
23.9
|
1.0
|
C
|
B:GLU205
|
3.9
|
25.8
|
1.0
|
CB
|
B:LYS206
|
4.0
|
25.4
|
1.0
|
CG
|
B:LYS206
|
4.0
|
33.9
|
1.0
|
O
|
B:HOH508
|
4.1
|
40.2
|
1.0
|
CA
|
B:LYS206
|
4.2
|
22.8
|
1.0
|
CB
|
B:GLU205
|
4.2
|
26.3
|
1.0
|
CG
|
B:GLU205
|
4.6
|
41.0
|
1.0
|
CD
|
B:LYS206
|
4.7
|
39.7
|
1.0
|
O
|
B:LEU204
|
4.8
|
27.7
|
1.0
|
N
|
B:GLU205
|
4.8
|
24.5
|
1.0
|
CE
|
B:LYS206
|
4.8
|
51.2
|
1.0
|
|
Reference:
Joint Center For Structural Genomics (Jcsg),
Joint Center For Structural Genomics (Jcsg).
N/A N/A.
Page generated: Fri Jul 11 23:57:00 2025
|