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Chlorine in PDB 5a8b: Structure of A Parallel Dimer of the Aureochrome 1A Lov Domain From Phaeodactylum Tricornutum

Protein crystallography data

The structure of Structure of A Parallel Dimer of the Aureochrome 1A Lov Domain From Phaeodactylum Tricornutum, PDB code: 5a8b was solved by A.Banerjee, E.Herman, T.Kottke, L.O.Essen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.700 / 2.79
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 56.391, 75.550, 77.664, 90.00, 94.73, 90.00
R / Rfree (%) 17.03 / 23

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of A Parallel Dimer of the Aureochrome 1A Lov Domain From Phaeodactylum Tricornutum (pdb code 5a8b). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of A Parallel Dimer of the Aureochrome 1A Lov Domain From Phaeodactylum Tricornutum, PDB code: 5a8b:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5a8b

Go back to Chlorine Binding Sites List in 5a8b
Chlorine binding site 1 out of 2 in the Structure of A Parallel Dimer of the Aureochrome 1A Lov Domain From Phaeodactylum Tricornutum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of A Parallel Dimer of the Aureochrome 1A Lov Domain From Phaeodactylum Tricornutum within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl452

b:62.1
occ:1.00
CD1 A:PHE241 4.1 53.7 1.0
CD2 B:PHE332 4.2 19.1 1.0
CZ A:PHE239 4.2 54.0 1.0
CE1 A:PHE241 4.3 48.2 1.0
CE2 B:PHE332 4.4 25.2 1.0
CE1 A:PHE239 4.5 48.7 1.0
CG A:PHE241 4.5 49.3 1.0
CG B:PHE332 4.5 22.0 1.0
CZ B:PHE241 4.6 35.6 1.0
CE1 B:PHE241 4.7 38.1 1.0
CZ A:PHE241 4.8 41.5 1.0
CD2 A:PHE241 4.9 48.5 1.0
CZ B:PHE332 5.0 15.4 1.0

Chlorine binding site 2 out of 2 in 5a8b

Go back to Chlorine Binding Sites List in 5a8b
Chlorine binding site 2 out of 2 in the Structure of A Parallel Dimer of the Aureochrome 1A Lov Domain From Phaeodactylum Tricornutum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of A Parallel Dimer of the Aureochrome 1A Lov Domain From Phaeodactylum Tricornutum within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl451

b:53.8
occ:1.00
CD2 D:PHE332 3.9 24.5 1.0
CE2 D:PHE332 4.2 27.5 1.0
CG D:PHE332 4.3 23.4 1.0
CE1 C:PHE241 4.6 40.7 1.0
OD2 C:ASP312 4.6 33.7 1.0
CD1 C:PHE241 4.7 50.1 1.0
CB D:PHE332 4.8 21.2 1.0
CZ D:PHE332 4.8 31.9 1.0
CD1 D:PHE332 4.9 34.4 1.0
CZ C:PHE241 4.9 37.9 1.0

Reference:

A.Banerjee, E.Herman, T.Kottke, L.O.Essen. Structure of A Native-Like Aureochrome 1A Lov Domain Dimer From Phaeodactylum Tricornutum. Structure V. 24 171 2016.
ISSN: ISSN 0969-2126
PubMed: 26688213
DOI: 10.1016/J.STR.2015.10.022
Page generated: Sat Jul 12 00:01:25 2025

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