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Chlorine in PDB 5ale: Ligand Complex Structure of Soluble Epoxide Hydrolase

Enzymatic activity of Ligand Complex Structure of Soluble Epoxide Hydrolase

All present enzymatic activity of Ligand Complex Structure of Soluble Epoxide Hydrolase:
3.1.3.76; 3.3.2.10;

Protein crystallography data

The structure of Ligand Complex Structure of Soluble Epoxide Hydrolase, PDB code: 5ale was solved by L.Oster, S.Tapani, Y.Xue, H.Kack, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.48 / 1.95
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 92.320, 92.320, 243.906, 90.00, 90.00, 120.00
R / Rfree (%) 19.6 / 23.08

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Ligand Complex Structure of Soluble Epoxide Hydrolase (pdb code 5ale). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Ligand Complex Structure of Soluble Epoxide Hydrolase, PDB code: 5ale:

Chlorine binding site 1 out of 1 in 5ale

Go back to Chlorine Binding Sites List in 5ale
Chlorine binding site 1 out of 1 in the Ligand Complex Structure of Soluble Epoxide Hydrolase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Ligand Complex Structure of Soluble Epoxide Hydrolase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1554

b:34.9
occ:1.00
CL7 A:ONR1554 0.0 34.9 1.0
C6 A:ONR1554 1.7 34.6 1.0
C5 A:ONR1554 2.7 37.9 1.0
C1 A:ONR1554 2.7 35.4 1.0
CD2 A:LEU408 3.5 20.2 1.0
CE1 A:PHE267 3.8 18.3 1.0
CZ A:PHE387 3.9 21.1 1.0
C2 A:ONR1554 4.0 38.2 1.0
C4 A:ONR1554 4.0 42.7 1.0
CD1 A:PHE267 4.1 17.4 1.0
CE2 A:PHE387 4.4 23.1 1.0
C3 A:ONR1554 4.4 39.9 1.0
CD1 A:LEU408 4.7 18.1 1.0
CG A:LEU408 4.7 18.3 1.0
CG A:LEU428 4.7 34.0 1.0
CG A:PRO268 4.8 17.3 1.0
CD A:PRO268 4.8 13.0 1.0
CD2 A:LEU428 4.9 37.5 1.0
SD A:MET419 4.9 56.3 1.0
CE1 A:PHE387 4.9 21.5 1.0
CD1 A:LEU428 4.9 34.0 1.0

Reference:

L.Oster, S.Tapani, Y.Xue, H.Kack. Successful Generation of Structural Information For Fragment-Based Drug Discovery. Drug Discov Today 2015.
ISSN: ESSN 1878-5832
PubMed: 25931264
DOI: 10.1016/J.DRUDIS.2015.04.005
Page generated: Sat Jul 12 00:15:09 2025

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