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Chlorine in PDB 5c1c: Crystal Structure of the Pectin Methylesterase From Aspergillus Niger in Deglycosylated Form

Enzymatic activity of Crystal Structure of the Pectin Methylesterase From Aspergillus Niger in Deglycosylated Form

All present enzymatic activity of Crystal Structure of the Pectin Methylesterase From Aspergillus Niger in Deglycosylated Form:
3.1.1.11;

Protein crystallography data

The structure of Crystal Structure of the Pectin Methylesterase From Aspergillus Niger in Deglycosylated Form, PDB code: 5c1c was solved by G.B.Jameson, M.A.K.Williams, T.S.Loo, L.M.Kent, L.D.Melton, D.Mercadante, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.23 / 1.80
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 75.249, 113.843, 88.741, 90.00, 90.00, 90.00
R / Rfree (%) 17 / 20.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Pectin Methylesterase From Aspergillus Niger in Deglycosylated Form (pdb code 5c1c). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Pectin Methylesterase From Aspergillus Niger in Deglycosylated Form, PDB code: 5c1c:

Chlorine binding site 1 out of 1 in 5c1c

Go back to Chlorine Binding Sites List in 5c1c
Chlorine binding site 1 out of 1 in the Crystal Structure of the Pectin Methylesterase From Aspergillus Niger in Deglycosylated Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Pectin Methylesterase From Aspergillus Niger in Deglycosylated Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl406

b:50.1
occ:1.00
O A:HOH591 3.4 30.4 1.0
ND2 A:ASN152 3.5 17.4 1.0
NZ A:LYS173 3.5 18.8 1.0
CE A:LYS173 4.2 18.0 1.0
CG A:ASN152 4.5 16.9 1.0
OD1 A:ASN152 4.5 17.6 1.0
O A:HOH808 4.8 34.3 1.0
CD A:LYS173 5.0 16.6 1.0

Reference:

L.M.Kent, T.S.Loo, L.D.Melton, D.Mercadante, M.A.Williams, G.B.Jameson. Structure and Properties of A Non-Processive, Salt-Requiring, and Acidophilic Pectin Methylesterase From Aspergillus Niger Provide Insights Into the Key Determinants of Processivity Control. J.Biol.Chem. V. 291 1289 2016.
ISSN: ESSN 1083-351X
PubMed: 26567911
DOI: 10.1074/JBC.M115.673152
Page generated: Fri Jul 26 05:50:26 2024

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