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Chlorine in PDB 5dez: Crystal Structure of Acmnpv Chitinase A

Enzymatic activity of Crystal Structure of Acmnpv Chitinase A

All present enzymatic activity of Crystal Structure of Acmnpv Chitinase A:
3.2.1.14;

Protein crystallography data

The structure of Crystal Structure of Acmnpv Chitinase A, PDB code: 5dez was solved by T.-C.Mou, S.R.Sprang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 14.99 / 2.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 96.931, 111.927, 129.516, 90.00, 90.00, 90.00
R / Rfree (%) 17.2 / 22.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Acmnpv Chitinase A (pdb code 5dez). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Acmnpv Chitinase A, PDB code: 5dez:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 5dez

Go back to Chlorine Binding Sites List in 5dez
Chlorine binding site 1 out of 3 in the Crystal Structure of Acmnpv Chitinase A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Acmnpv Chitinase A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl606

b:46.2
occ:1.00
NZ A:LYS50 3.3 23.3 1.0
O A:HOH868 3.7 22.9 1.0
N A:ASP54 3.7 18.2 1.0
CA A:VAL53 4.2 13.1 1.0
CD A:LYS50 4.2 27.5 1.0
O A:HOH912 4.2 20.0 1.0
CE A:LYS50 4.3 24.1 1.0
CG2 A:VAL53 4.3 15.5 1.0
C A:VAL53 4.5 16.3 1.0
CA A:ASP54 4.6 17.6 1.0
CB A:ASP54 4.7 20.0 1.0
O A:ASP54 4.7 16.4 1.0
CD2 A:TYR31 4.7 16.4 1.0
CB A:VAL53 4.7 17.4 1.0
OE2 A:GLU35 4.8 34.0 1.0
O A:GLN52 4.8 21.1 1.0
CG1 A:VAL53 5.0 14.9 1.0

Chlorine binding site 2 out of 3 in 5dez

Go back to Chlorine Binding Sites List in 5dez
Chlorine binding site 2 out of 3 in the Crystal Structure of Acmnpv Chitinase A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Acmnpv Chitinase A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl607

b:27.2
occ:1.00
ND2 A:ASN45 3.0 41.4 1.0
N A:THR41 3.2 23.4 1.0
N A:ALA42 3.5 23.6 1.0
OG1 A:THR41 3.6 35.2 1.0
CA A:ALA40 3.9 23.2 1.0
CB A:ALA42 4.0 19.9 1.0
CG A:ASN45 4.0 30.5 1.0
C A:ALA40 4.0 23.8 1.0
CB A:ASN45 4.1 29.5 1.0
CB A:ALA40 4.1 20.0 1.0
CA A:THR41 4.1 27.0 1.0
C A:THR41 4.3 23.1 1.0
CA A:ALA42 4.3 18.8 1.0
CB A:THR41 4.5 27.2 1.0
O A:ALA42 4.8 21.3 1.0

Chlorine binding site 3 out of 3 in 5dez

Go back to Chlorine Binding Sites List in 5dez
Chlorine binding site 3 out of 3 in the Crystal Structure of Acmnpv Chitinase A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Acmnpv Chitinase A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl608

b:39.4
occ:1.00
O B:HOH822 3.4 20.9 1.0
NH1 B:ARG211 3.4 20.4 1.0
O B:HOH1001 3.5 32.0 1.0
CG B:GLU289 3.6 35.2 1.0
NH2 B:ARG211 3.7 23.0 1.0
CZ B:ARG211 4.0 18.0 1.0
NZ B:LYS215 4.0 27.6 1.0
CE B:LYS215 4.3 26.2 1.0
CB B:GLU289 4.4 18.5 1.0
OE1 B:GLU289 4.4 42.7 1.0
CD B:LYS215 4.4 25.3 1.0
CD B:GLU289 4.4 46.6 1.0
O B:HOH840 4.9 15.3 1.0
O B:HOH1010 4.9 33.2 1.0

Reference:

T.-C.Mou, S.R.Sprang. Crystal Structure of Acmnpv Chitinase A To Be Published.
Page generated: Sat Jul 12 01:13:10 2025

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