Chlorine in PDB 5dhv: Hiv-1 Rev Ntd Dimers with Variable Crossing Angles

The structure of Hiv-1 Rev Ntd Dimers with Variable Crossing Angles, PDB code: 5dhv was solved by M.A.Dimattia, N.R.Watts, P.T.Wingfield, J.M.Grimes, D.I.Stuart, A.C.Steven, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.28 / 2.30
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	43.895, 81.869, 98.809, 90.00, 101.09, 90.00
R / Rfree (%)	18.8 / 22.7

The binding sites of Chlorine atom in the Hiv-1 Rev Ntd Dimers with Variable Crossing Angles (pdb code 5dhv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Hiv-1 Rev Ntd Dimers with Variable Crossing Angles, PDB code: 5dhv:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Hiv-1 Rev Ntd Dimers with Variable Crossing Angles


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Hiv-1 Rev Ntd Dimers with Variable Crossing Angles within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl201 b:81.8 occ:1.00 N B:GLU1 3.0 66.7 1.0 N A:SER62 3.3 67.8 1.0 OG A:SER62 3.8 90.7 1.0 CG B:ARG98 3.8 58.0 1.0 CB A:SER62 3.8 78.0 1.0 CB B:ARG98 3.9 53.0 1.0 CA A:ALA61 3.9 54.9 1.0 C A:ALA61 4.1 66.4 1.0 CA A:SER62 4.1 71.4 1.0 O B:TYR97 4.4 64.9 1.0 CA B:GLU1 4.5 69.7 1.0 CB A:ALA61 4.5 54.0 1.0 O A:TYR60 5.0 55.5 1.0 N B:LEU2 5.0 63.3 1.0

Chlorine binding site 2 out of 2 in the Hiv-1 Rev Ntd Dimers with Variable Crossing Angles


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Hiv-1 Rev Ntd Dimers with Variable Crossing Angles within 5.0Å range: probe atom residue distance (Å) B Occ H:Cl201 b:72.1 occ:1.00 N L:GLU1 3.1 50.5 1.0 O L:HOH230 3.3 52.8 1.0 N H:SER62 3.5 42.0 1.0 OG H:SER62 3.7 70.2 1.0 O L:HOH227 3.9 45.7 1.0 CB H:SER62 3.9 53.5 1.0 CA H:ALA61 4.0 36.8 1.0 CG L:ARG98 4.1 31.9 1.0 CB L:ARG98 4.1 37.6 1.0 C H:ALA61 4.2 42.4 1.0 CA H:SER62 4.3 45.1 1.0 CB H:ALA61 4.4 37.1 1.0 O L:HOH237 4.5 48.9 1.0 CA L:GLU1 4.5 51.1 1.0 O L:TYR97 4.6 43.0 1.0 N L:LEU2 4.9 45.2 1.0

M.A.Dimattia, N.R.Watts, N.Cheng, R.Huang, J.B.Heymann, J.M.Grimes, P.T.Wingfield, D.I.Stuart, A.C.Steven. The Structure of Hiv-1 Rev Filaments Suggests A Bilateral Model For Rev-Rre Assembly. Structure V. 24 1068 2016.
ISSN: ISSN 0969-2126
PubMed: 27265851
DOI: 10.1016/J.STR.2016.04.015