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Chlorine in PDB 5dqy: A Fully Oxidized Human Thioredoxin

Protein crystallography data

The structure of A Fully Oxidized Human Thioredoxin, PDB code: 5dqy was solved by J.Hwang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.00 / 1.40
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 53.204, 61.231, 64.839, 90.00, 90.00, 90.00
R / Rfree (%) 15.8 / 20.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the A Fully Oxidized Human Thioredoxin (pdb code 5dqy). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the A Fully Oxidized Human Thioredoxin, PDB code: 5dqy:

Chlorine binding site 1 out of 1 in 5dqy

Go back to Chlorine Binding Sites List in 5dqy
Chlorine binding site 1 out of 1 in the A Fully Oxidized Human Thioredoxin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of A Fully Oxidized Human Thioredoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:12.4
occ:1.00
N A:ASN51 3.2 11.4 1.0
C A:TYR49 3.5 11.5 1.0
CA A:TYR49 3.6 10.3 1.0
N A:SER50 3.6 11.3 1.0
CB A:ASN51 3.7 11.4 1.0
CA A:ASN51 3.8 11.6 1.0
CB A:TYR49 4.0 11.5 1.0
CG2 A:VAL52 4.0 10.7 1.0
N A:VAL52 4.0 9.3 1.0
O A:TYR49 4.0 10.7 1.0
C A:ASN51 4.0 9.6 1.0
CD1 A:TYR49 4.3 10.0 1.0
C A:SER50 4.4 12.4 1.0
CG A:TYR49 4.6 10.1 1.0
CA A:SER50 4.6 13.3 1.0
CG A:ASN51 4.7 14.0 1.0
CB A:VAL52 4.8 8.3 1.0
O A:ASN51 4.8 11.5 1.0
O A:LYS48 4.9 11.7 1.0
N A:TYR49 4.9 11.1 1.0
CA A:VAL52 5.0 8.7 1.0

Reference:

J.Hwang, L.T.Nguyen, Y.H.Jeon, C.Y.Lee, M.H.Kim. Crystal Structure of Fully Oxidized Human Thioredoxin. Biochem.Biophys.Res.Commun. V. 467 218 2015.
ISSN: ESSN 1090-2104
PubMed: 26453009
DOI: 10.1016/J.BBRC.2015.10.003
Page generated: Fri Jul 26 06:51:22 2024

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