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Chlorine in PDB 5dz6: Acyl Transferase From Bacillaene Pks

Enzymatic activity of Acyl Transferase From Bacillaene Pks

All present enzymatic activity of Acyl Transferase From Bacillaene Pks:
2.3.1.39;

Protein crystallography data

The structure of Acyl Transferase From Bacillaene Pks, PDB code: 5dz6 was solved by M.Till, P.R.Race, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.09 / 1.44
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 53.190, 70.430, 76.280, 90.00, 90.00, 90.00
R / Rfree (%) 16.3 / 18.5

Other elements in 5dz6:

The structure of Acyl Transferase From Bacillaene Pks also contains other interesting chemical elements:

Bromine (Br) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Acyl Transferase From Bacillaene Pks (pdb code 5dz6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Acyl Transferase From Bacillaene Pks, PDB code: 5dz6:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5dz6

Go back to Chlorine Binding Sites List in 5dz6
Chlorine binding site 1 out of 2 in the Acyl Transferase From Bacillaene Pks


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Acyl Transferase From Bacillaene Pks within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:7.8
occ:1.00
O A:HOH598 2.6 28.9 1.0
OG1 A:THR237 2.9 10.1 1.0
O A:HOH495 3.1 8.4 1.0
N A:THR230 3.5 6.6 1.0
CB A:PHE233 3.8 6.1 1.0
CB A:THR237 3.8 7.5 1.0
CA A:TYR229 3.9 5.3 1.0
CG2 A:THR237 3.9 6.6 1.0
OG1 A:THR230 4.0 13.1 1.0
C A:TYR229 4.1 6.4 1.0
O A:PRO228 4.2 6.1 1.0
O A:HOH683 4.2 30.0 1.0
O A:PHE233 4.3 6.4 1.0
O A:THR230 4.4 10.9 1.0
CD2 A:TYR225 4.5 7.6 1.0
O A:HOH681 4.5 30.0 1.0
CE2 A:TYR225 4.5 8.1 1.0
C A:PHE233 4.5 6.3 1.0
CA A:THR230 4.5 9.3 1.0
CD2 A:TYR229 4.5 6.6 1.0
CG A:TYR229 4.7 6.0 1.0
CB A:THR230 4.7 11.7 1.0
CB A:TYR229 4.7 6.7 1.0
CA A:PHE233 4.8 6.3 1.0
N A:TYR229 4.8 4.9 1.0
CG A:PHE233 4.9 6.1 1.0
CG2 A:THR230 4.9 11.6 1.0
C A:PRO228 4.9 5.0 1.0
C A:THR230 4.9 9.5 1.0

Chlorine binding site 2 out of 2 in 5dz6

Go back to Chlorine Binding Sites List in 5dz6
Chlorine binding site 2 out of 2 in the Acyl Transferase From Bacillaene Pks


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Acyl Transferase From Bacillaene Pks within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl305

b:12.2
occ:1.00
OG1 A:THR54 3.1 9.2 1.0
O A:HOH640 3.1 8.1 1.0
OE1 A:GLN9 3.4 20.0 1.0
CB A:GLN9 3.5 20.0 1.0
CG A:GLN58 3.6 7.3 1.0
CG2 A:THR57 3.8 8.5 1.0
CB A:THR57 3.8 7.7 1.0
CG A:GLN9 3.8 20.0 1.0
O A:HOH578 3.8 20.8 1.0
CD A:GLN9 4.0 20.0 1.0
CB A:THR54 4.1 8.2 1.0
NE2 A:GLN58 4.1 8.1 1.0
CA A:GLN9 4.2 6.5 1.0
O A:HOH603 4.2 21.2 1.0
CD A:GLN58 4.3 8.1 1.0
CA A:THR54 4.5 7.9 1.0
OG1 A:THR57 4.5 8.0 1.0
N A:GLN58 4.6 6.8 1.0
N A:GLN9 4.7 6.2 1.0
O A:HOH527 4.7 17.0 1.0
O A:HOH561 4.8 6.0 1.0
O A:THR54 4.8 8.4 1.0
C A:THR57 4.9 6.9 1.0
CB A:GLN58 4.9 7.1 1.0
CA A:GLN58 4.9 7.2 1.0

Reference:

M.Till, N.J.Burton, T.D.Akrill, M.W.Van Der Kamp, G.E.Baker, M.J.Byrne, R.L.Owen, C.L.Willis, P.R.Race. Architectural Hierarchy of Trans-Acting Enoyl Reductases From Polyunsaturated Fatty Acid and Trans-Acyltransferase Polyketide Synthases To Be Published.
Page generated: Fri Jul 26 07:01:20 2024

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