Atomistry » Chlorine » PDB 5e20-5eae » 5e76
Atomistry »
  Chlorine »
    PDB 5e20-5eae »
      5e76 »

Chlorine in PDB 5e76: Crystal Structure of BACOVA_02651 with Xylogluco-Oligosaccharide

Protein crystallography data

The structure of Crystal Structure of BACOVA_02651 with Xylogluco-Oligosaccharide, PDB code: 5e76 was solved by N.M.Koropatkin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 56.13 / 2.30
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 131.500, 131.500, 188.040, 90.00, 90.00, 90.00
R / Rfree (%) 21.7 / 25.3

Other elements in 5e76:

The structure of Crystal Structure of BACOVA_02651 with Xylogluco-Oligosaccharide also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of BACOVA_02651 with Xylogluco-Oligosaccharide (pdb code 5e76). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of BACOVA_02651 with Xylogluco-Oligosaccharide, PDB code: 5e76:

Chlorine binding site 1 out of 1 in 5e76

Go back to Chlorine Binding Sites List in 5e76
Chlorine binding site 1 out of 1 in the Crystal Structure of BACOVA_02651 with Xylogluco-Oligosaccharide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of BACOVA_02651 with Xylogluco-Oligosaccharide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl615

b:34.3
occ:1.00
HH22 A:ARG74 2.3 20.7 1.0
HH12 A:ARG74 2.5 22.4 1.0
H A:VAL92 2.6 24.4 1.0
HA A:PHE90 2.7 23.2 1.0
HB A:VAL92 2.9 25.2 1.0
NH2 A:ARG74 3.0 32.8 1.0
NH1 A:ARG74 3.2 35.3 1.0
HG23 A:VAL92 3.2 25.5 1.0
HD1 A:PHE90 3.3 21.3 1.0
HD23 A:LEU522 3.4 21.9 1.0
O A:HOH829 3.4 34.8 1.0
N A:VAL92 3.4 36.0 1.0
C A:PHE90 3.4 35.1 1.0
CA A:PHE90 3.4 35.2 1.0
CZ A:ARG74 3.5 34.3 1.0
HD21 A:LEU522 3.5 21.9 1.0
CB A:VAL92 3.6 37.0 1.0
HB3 A:PHE90 3.7 22.1 1.0
HH21 A:ARG74 3.7 20.7 1.0
O A:PHE90 3.8 33.8 1.0
CG2 A:VAL92 3.8 37.9 1.0
N A:GLN91 3.8 37.1 1.0
O A:ASP519 3.9 33.6 1.0
CD2 A:LEU522 3.9 36.0 1.0
HH11 A:ARG74 3.9 22.4 1.0
HG21 A:VAL92 4.0 25.5 1.0
CD1 A:PHE90 4.0 32.8 1.0
CB A:PHE90 4.0 33.6 1.0
CA A:VAL92 4.0 36.9 1.0
H A:GLN91 4.0 24.8 1.0
O A:VAL92 4.2 34.5 1.0
HB3 A:ASP519 4.3 20.8 1.0
HD22 A:LEU522 4.4 21.9 1.0
CG A:PHE90 4.4 33.4 1.0
C A:GLN91 4.4 38.0 1.0
CA A:GLN91 4.5 37.2 1.0
HA A:GLN91 4.6 25.1 1.0
C A:VAL92 4.6 36.0 1.0
HG22 A:VAL92 4.7 25.5 1.0
N A:PHE90 4.7 36.6 1.0
H A:PHE90 4.7 24.1 1.0
O A:GLN86 4.8 37.9 1.0
NE A:ARG74 4.8 34.8 1.0
HA A:ASP519 4.8 20.6 1.0
HA A:LEU522 4.9 21.2 1.0
HA A:PHE87 4.9 25.7 1.0
HD3 A:PRO523 4.9 22.6 1.0
HA A:VAL92 4.9 25.2 1.0
HB2 A:PHE90 4.9 22.1 1.0
C A:ASP519 4.9 32.2 1.0
HG A:LEU522 5.0 21.2 1.0
CG1 A:VAL92 5.0 38.1 1.0

Reference:

A.S.Tauzin, K.J.Kwiatkowski, N.I.Orlovsky, C.J.Smith, A.L.Creagh, C.A.Haynes, Z.Wawrzak, H.Brumer, N.M.Koropatkin. Molecular Dissection of Xyloglucan Recognition in A Prominent Human Gut Symbiont. Mbio V. 7 02134 2016.
ISSN: ESSN 2150-7511
PubMed: 27118585
DOI: 10.1128/MBIO.02134-15
Page generated: Fri Jul 26 07:07:17 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy