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Chlorine in PDB 5ha4: Structure of A Diaminopimelate Epimerase From Acinetobacter Baumannii

Enzymatic activity of Structure of A Diaminopimelate Epimerase From Acinetobacter Baumannii

All present enzymatic activity of Structure of A Diaminopimelate Epimerase From Acinetobacter Baumannii:
5.1.1.7;

Protein crystallography data

The structure of Structure of A Diaminopimelate Epimerase From Acinetobacter Baumannii, PDB code: 5ha4 was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 70.380, 96.180, 106.240, 90.00, 90.00, 90.00
R / Rfree (%) 16.4 / 19

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of A Diaminopimelate Epimerase From Acinetobacter Baumannii (pdb code 5ha4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of A Diaminopimelate Epimerase From Acinetobacter Baumannii, PDB code: 5ha4:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5ha4

Go back to Chlorine Binding Sites List in 5ha4
Chlorine binding site 1 out of 2 in the Structure of A Diaminopimelate Epimerase From Acinetobacter Baumannii


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of A Diaminopimelate Epimerase From Acinetobacter Baumannii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:22.7
occ:0.90
NE A:ARG187 3.0 17.6 1.0
O A:HOH459 3.2 32.2 1.0
N A:GLU144 3.2 22.0 1.0
O A:HOH522 3.3 34.9 1.0
CE1 A:HIS185 3.6 19.6 1.0
CB A:GLU144 3.6 24.7 1.0
CD A:ARG187 3.7 16.7 1.0
NE2 A:HIS185 3.8 18.8 1.0
CG A:GLU144 3.9 24.2 1.0
CA A:GLU144 4.0 19.9 1.0
CZ A:ARG187 4.1 21.7 1.0
NH2 A:ARG187 4.2 21.2 1.0
C A:LEU143 4.2 26.3 1.0
CA A:LEU143 4.2 17.4 1.0
O A:GLU144 4.3 27.0 1.0
OE2 A:GLU144 4.3 39.1 1.0
CD1 A:LEU143 4.3 18.9 1.0
CG A:ARG187 4.4 16.6 1.0
CD A:GLU144 4.5 39.0 1.0
O A:THR142 4.5 25.6 1.0
C A:GLU144 4.6 24.6 1.0
ND1 A:HIS185 4.7 16.6 1.0
CG A:LEU143 4.9 20.6 1.0

Chlorine binding site 2 out of 2 in 5ha4

Go back to Chlorine Binding Sites List in 5ha4
Chlorine binding site 2 out of 2 in the Structure of A Diaminopimelate Epimerase From Acinetobacter Baumannii


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of A Diaminopimelate Epimerase From Acinetobacter Baumannii within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl401

b:39.0
occ:0.88
NE B:ARG187 3.0 30.4 1.0
N B:GLU144 3.3 33.4 1.0
O B:HOH562 3.3 49.6 1.0
CD B:ARG187 3.6 29.7 1.0
CE1 B:HIS185 3.6 38.4 1.0
CB B:GLU144 3.8 35.3 1.0
NE2 B:HIS185 3.9 34.6 1.0
CG B:GLU144 4.0 44.5 1.0
CZ B:ARG187 4.0 36.2 1.0
CA B:GLU144 4.1 32.2 1.0
CD1 B:LEU143 4.1 35.6 1.0
CA B:LEU143 4.2 31.0 1.0
C B:LEU143 4.2 32.8 1.0
NH2 B:ARG187 4.2 35.8 1.0
O B:THR142 4.3 44.2 1.0
CG B:ARG187 4.3 28.3 1.0
O B:GLU144 4.4 38.7 1.0
C B:GLU144 4.7 36.1 1.0
ND1 B:HIS185 4.8 31.6 1.0
CG B:LEU143 4.8 31.7 1.0
O B:HOH714 4.9 54.1 1.0

Reference:

S.J.Mayclin, D.D.Lorimer, T.E.Edwards. Structure of A Diaminopimelate Epimerase From Acinetobacter Baumannii To Be Published.
Page generated: Sat Jul 12 02:42:46 2025

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