Chlorine in PDB 5hb3: Crystal Structure of Chaetomium Thermophilum NIC96 Sol-NUP53 Complex

The structure of Crystal Structure of Chaetomium Thermophilum NIC96 Sol-NUP53 Complex, PDB code: 5hb3 was solved by D.H.Lin, T.Stuwe, A.Hoelz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.29 / 2.65
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	59.520, 86.950, 98.010, 100.69, 99.59, 95.66
R / Rfree (%)	21.2 / 24.9

The binding sites of Chlorine atom in the Crystal Structure of Chaetomium Thermophilum NIC96 Sol-NUP53 Complex (pdb code 5hb3). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Chaetomium Thermophilum NIC96 Sol-NUP53 Complex, PDB code: 5hb3:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Crystal Structure of Chaetomium Thermophilum NIC96 Sol-NUP53 Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Chaetomium Thermophilum NIC96 Sol-NUP53 Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1201 b:62.1 occ:1.00 H A:LEU648 2.6 78.3 1.0 HD1 A:TRP658 2.7 56.0 1.0 HD11 B:ILE76 2.9 93.7 1.0 HB2 A:TRP658 2.9 57.8 1.0 HD13 B:ILE76 3.1 93.7 1.0 HA A:TRP658 3.1 54.7 1.0 HA A:SER647 3.2 66.4 1.0 HG1 A:THR653 3.3 86.2 1.0 CD1 B:ILE76 3.4 78.1 1.0 N A:LEU648 3.4 65.3 1.0 CD1 A:TRP658 3.5 46.7 1.0 HB2 A:LEU648 3.5 84.5 1.0 HB2 A:SER647 3.6 70.7 1.0 CB A:TRP658 3.6 48.1 1.0 HD12 B:ILE76 3.7 93.7 1.0 CA A:TRP658 3.7 45.6 1.0 CG A:TRP658 4.0 48.4 1.0 OG1 A:THR653 4.0 71.8 1.0 CA A:SER647 4.0 55.3 1.0 HG A:LEU648 4.0 86.5 1.0 HD12 A:LEU648 4.1 76.0 1.0 N A:TRP658 4.2 47.2 1.0 C A:SER647 4.2 61.2 1.0 CB A:SER647 4.2 58.9 1.0 CB A:LEU648 4.2 70.4 1.0 H A:TRP658 4.3 56.6 1.0 CA A:LEU648 4.3 63.9 1.0 HB A:THR653 4.3 85.5 1.0 HB3 A:TRP658 4.5 57.8 1.0 HB3 A:SER647 4.5 70.7 1.0 CG A:LEU648 4.5 72.1 1.0 HD22 A:LEU661 4.5 56.9 1.0 O A:LEU648 4.6 79.0 1.0 HD23 A:LEU661 4.6 56.9 1.0 CB A:THR653 4.7 71.3 1.0 HG21 A:THR653 4.7 81.1 1.0 CG1 B:ILE76 4.7 79.6 1.0 C A:LEU648 4.8 71.0 1.0 NE1 A:TRP658 4.8 46.2 1.0 CD1 A:LEU648 4.8 63.3 1.0 HG12 B:ILE76 4.8 95.5 1.0 C A:ASP657 4.8 47.9 1.0 HB2 A:ASP657 4.9 65.7 1.0 O A:ASP654 5.0 59.2 1.0 HG21 B:ILE76 5.0 74.7 1.0

Chlorine binding site 2 out of 3 in the Crystal Structure of Chaetomium Thermophilum NIC96 Sol-NUP53 Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Chaetomium Thermophilum NIC96 Sol-NUP53 Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl1201 b:57.1 occ:1.00 H C:LEU648 2.5 77.2 1.0 HD1 C:TRP658 2.7 63.1 1.0 HB2 C:TRP658 2.9 53.6 1.0 HD11 D:ILE76 3.0 88.3 1.0 HD13 D:ILE76 3.1 88.3 1.0 HB2 C:LEU648 3.2 74.6 1.0 HA C:TRP658 3.3 54.0 1.0 N C:LEU648 3.3 64.3 1.0 HA C:SER647 3.3 74.3 1.0 CD1 D:ILE76 3.5 73.6 1.0 HG1 C:THR653 3.5 75.6 1.0 CD1 C:TRP658 3.5 52.6 1.0 CB C:TRP658 3.6 44.7 1.0 HG C:LEU648 3.7 76.2 1.0 CA C:TRP658 3.9 45.0 1.0 HD12 C:LEU648 3.9 70.8 1.0 HB3 C:SER647 3.9 77.1 1.0 CB C:LEU648 3.9 62.2 1.0 CG C:TRP658 4.0 47.6 1.0 HD12 D:ILE76 4.1 88.3 1.0 CA C:SER647 4.1 61.9 1.0 CA C:LEU648 4.1 58.8 1.0 OG1 C:THR653 4.1 63.0 1.0 C C:SER647 4.2 66.7 1.0 CG C:LEU648 4.2 63.5 1.0 N C:TRP658 4.3 48.2 1.0 H C:TRP658 4.4 57.9 1.0 HB3 C:TRP658 4.5 53.6 1.0 CB C:SER647 4.5 64.2 1.0 HG12 D:ILE76 4.5 95.7 1.0 CD1 C:LEU648 4.5 59.0 1.0 HB C:THR653 4.6 70.1 1.0 C C:LEU648 4.7 69.7 1.0 CG1 D:ILE76 4.7 79.7 1.0 O C:LEU648 4.7 71.8 1.0 HB3 C:LEU648 4.7 74.6 1.0 NE1 C:TRP658 4.8 57.5 1.0 HD23 C:LEU661 4.8 62.8 1.0 HG21 D:ILE76 4.9 78.9 1.0 HB2 C:ASP657 4.9 52.1 1.0 C C:ASP657 4.9 46.5 1.0 CB C:THR653 5.0 58.4 1.0 HD22 C:LEU661 5.0 62.8 1.0 HA C:LEU648 5.0 70.6 1.0

Chlorine binding site 3 out of 3 in the Crystal Structure of Chaetomium Thermophilum NIC96 Sol-NUP53 Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Chaetomium Thermophilum NIC96 Sol-NUP53 Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl1202 b:51.6 occ:1.00 HE A:ARG671 2.5 81.2 1.0 H C:LEU539 2.6 56.5 1.0 H C:VAL540 2.7 72.2 1.0 HB3 C:LEU539 2.8 57.3 1.0 HH21 A:ARG671 2.8 87.8 1.0 HA C:LYS537 2.9 66.9 1.0 HG22 C:VAL540 3.1 65.6 1.0 HA C:ILE534 3.3 53.1 1.0 NE A:ARG671 3.4 67.7 1.0 N C:LEU539 3.4 47.1 1.0 N C:VAL540 3.5 60.2 1.0 HG23 C:VAL540 3.6 65.6 1.0 CB C:LEU539 3.6 47.7 1.0 NH2 A:ARG671 3.6 73.2 1.0 CA C:LYS537 3.8 55.8 1.0 CG2 C:VAL540 3.8 54.7 1.0 O C:VAL540 3.8 62.6 1.0 C C:LYS537 3.8 46.5 1.0 HB2 C:LEU539 3.8 57.3 1.0 CA C:LEU539 3.9 44.5 1.0 HG3 A:ARG671 3.9 66.8 1.0 N C:THR538 3.9 45.2 1.0 H C:THR538 3.9 54.2 1.0 CZ A:ARG671 4.0 69.5 1.0 HG2 A:ARG671 4.1 66.8 1.0 C C:LEU539 4.2 46.1 1.0 O C:LYS537 4.3 49.6 1.0 O C:ARG533 4.3 45.7 1.0 CA C:ILE534 4.3 44.2 1.0 CG A:ARG671 4.3 55.7 1.0 HH22 A:ARG671 4.3 87.8 1.0 O C:ILE534 4.4 53.6 1.0 HG21 C:VAL540 4.4 65.6 1.0 CA C:VAL540 4.4 61.2 1.0 H C:LYS537 4.4 58.4 1.0 CD A:ARG671 4.4 64.0 1.0 C C:THR538 4.5 50.6 1.0 HG12 C:ILE534 4.5 61.3 1.0 HG23 C:ILE534 4.5 66.4 1.0 HD23 C:LEU539 4.5 55.6 1.0 C C:VAL540 4.5 63.9 1.0 HB3 C:LYS537 4.6 64.8 1.0 N C:LYS537 4.6 48.7 1.0 CA C:THR538 4.7 46.3 1.0 CB C:VAL540 4.7 60.2 1.0 CB C:LYS537 4.8 54.0 1.0 CG C:LEU539 4.8 49.4 1.0 C C:ILE534 4.8 47.8 1.0 HG2 C:LYS537 4.8 69.1 1.0 HA C:LEU539 4.8 53.4 1.0 HA C:THR538 4.9 55.6 1.0 HG C:LEU539 5.0 59.3 1.0

D.H.Lin, T.Stuwe, S.Schilbach, E.J.Rundlet, T.Perriches, G.Mobbs, Y.Fan, K.Thierbach, F.M.Huber, L.N.Collins, A.M.Davenport, Y.E.Jeon, A.Hoelz. Architecture of the Symmetric Core of the Nuclear Pore. Science V. 352 F1015 2016.
ISSN: ESSN 1095-9203
PubMed: 27081075
DOI: 10.1126/SCIENCE.AAF1015