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Chlorine in PDB 5hgl: Hexameric Hiv-1 Ca, Open Conformation

Protein crystallography data

The structure of Hexameric Hiv-1 Ca, Open Conformation, PDB code: 5hgl was solved by A.J.Price, D.A.Jacques, L.C.James, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.99 / 3.10
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 89.690, 159.270, 249.399, 90.00, 90.00, 90.00
R / Rfree (%) 25 / 28.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Hexameric Hiv-1 Ca, Open Conformation (pdb code 5hgl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Hexameric Hiv-1 Ca, Open Conformation, PDB code: 5hgl:

Chlorine binding site 1 out of 1 in 5hgl

Go back to Chlorine Binding Sites List in 5hgl
Chlorine binding site 1 out of 1 in the Hexameric Hiv-1 Ca, Open Conformation


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Hexameric Hiv-1 Ca, Open Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:75.2
occ:1.00
NH1 B:ARG18 3.4 0.2 1.0
NH1 A:ARG18 3.7 1.0 1.0
NH1 F:ARG18 3.8 94.2 1.0
NH1 E:ARG18 4.0 0.6 1.0
NH1 C:ARG18 4.2 91.4 1.0
NH1 D:ARG18 4.4 0.9 1.0
CZ B:ARG18 4.5 0.6 1.0
NH2 B:ARG18 4.7 0.3 1.0
CZ A:ARG18 4.9 0.7 1.0
CZ F:ARG18 4.9 0.7 1.0

Reference:

D.A.Jacques, W.A.Mcewan, L.Hilditch, A.J.Price, G.J.Towers, L.C.James. Hiv-1 Uses Dynamic Capsid Pores to Import Nucleotides and Fuel Encapsidated Dna Synthesis. Nature V. 536 349 2016.
ISSN: ESSN 1476-4687
PubMed: 27509857
DOI: 10.1038/NATURE19098
Page generated: Fri Jul 26 08:50:23 2024

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