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Chlorine in PDB 5hjc: BRD3 Second Bromodomain in Complex with Histone H3 Acetylation at K18

Protein crystallography data

The structure of BRD3 Second Bromodomain in Complex with Histone H3 Acetylation at K18, PDB code: 5hjc was solved by Y.Y.Li, D.Zhao, H.P.Guan, H.T.Li, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.85 / 2.60
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 79.768, 79.768, 95.262, 90.00, 90.00, 120.00
R / Rfree (%) 21.7 / 26.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the BRD3 Second Bromodomain in Complex with Histone H3 Acetylation at K18 (pdb code 5hjc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the BRD3 Second Bromodomain in Complex with Histone H3 Acetylation at K18, PDB code: 5hjc:

Chlorine binding site 1 out of 1 in 5hjc

Go back to Chlorine Binding Sites List in 5hjc
Chlorine binding site 1 out of 1 in the BRD3 Second Bromodomain in Complex with Histone H3 Acetylation at K18


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of BRD3 Second Bromodomain in Complex with Histone H3 Acetylation at K18 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:52.6
occ:1.00
NZ A:LYS325 3.7 41.4 1.0
CB A:SER324 3.8 24.8 1.0
N A:LYS325 4.0 24.4 1.0
CA A:SER324 4.3 28.4 1.0
CG A:LYS325 4.4 36.4 1.0
C A:SER324 4.7 25.7 1.0
CB A:LYS325 4.8 27.0 1.0
CE A:LYS325 4.9 36.8 1.0
OG A:SER324 4.9 28.4 1.0

Reference:

Y.Y.Li, B.R.Sabari, T.Panchenko, H.Wen, D.Zhao, H.P.Guan, L.Wan, H.Huang, Z.Tang, Y.Zhao, R.G.Roeder, X.Shi, C.D.Allis, H.T.Li. Molecular Coupling of Histone Crotonylation and Active Transcription By AF9 Yeats Domain Mol.Cell V. 62 181 2016.
ISSN: ISSN 1097-2765
PubMed: 27105114
DOI: 10.1016/J.MOLCEL.2016.03.028
Page generated: Sat Jul 12 02:46:25 2025

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