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Chlorine in PDB 5hjy: Structure Function Studies of R. Palustris Rubisco (I165T Mutant; Cabp-Bound)

Enzymatic activity of Structure Function Studies of R. Palustris Rubisco (I165T Mutant; Cabp-Bound)

All present enzymatic activity of Structure Function Studies of R. Palustris Rubisco (I165T Mutant; Cabp-Bound):
4.1.1.39;

Protein crystallography data

The structure of Structure Function Studies of R. Palustris Rubisco (I165T Mutant; Cabp-Bound), PDB code: 5hjy was solved by M.A.Arbing, A.Shin, D.Cascio, S.Satagopan, J.A.North, F.R.Tabita, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 91.85 / 2.30
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 73.860, 100.020, 103.560, 107.84, 113.77, 96.09
R / Rfree (%) 18.3 / 22.5

Other elements in 5hjy:

The structure of Structure Function Studies of R. Palustris Rubisco (I165T Mutant; Cabp-Bound) also contains other interesting chemical elements:

Magnesium (Mg) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure Function Studies of R. Palustris Rubisco (I165T Mutant; Cabp-Bound) (pdb code 5hjy). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure Function Studies of R. Palustris Rubisco (I165T Mutant; Cabp-Bound), PDB code: 5hjy:

Chlorine binding site 1 out of 1 in 5hjy

Go back to Chlorine Binding Sites List in 5hjy
Chlorine binding site 1 out of 1 in the Structure Function Studies of R. Palustris Rubisco (I165T Mutant; Cabp-Bound)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure Function Studies of R. Palustris Rubisco (I165T Mutant; Cabp-Bound) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl503

b:50.6
occ:1.00
 HH22 D:ARG93 2.3 36.9 1.0
HH22 D:ARG22 2.9 46.6 1.0
NH2 D:ARG93 3.2 30.8 1.0
HG13 D:ILE88 3.3 37.9 1.0
HG3 D:GLU89 3.3 42.0 1.0
HH12 D:ARG93 3.3 38.0 1.0
HG11 C:VAL201 3.4 30.7 1.0
HD12 D:ILE88 3.4 38.6 1.0
NH2 D:ARG22 3.5 38.9 1.0
HD11 D:ILE88 3.5 38.6 1.0
HG21 C:VAL201 3.6 32.1 1.0
HH21 D:ARG22 3.7 46.6 1.0
O D:HOH700 3.7 44.3 1.0
HH21 D:ARG93 3.7 36.9 1.0
HA D:GLU89 3.8 37.7 1.0
CD1 D:ILE88 3.8 32.1 1.0
NH1 D:ARG93 3.9 31.7 1.0
CG1 D:ILE88 4.0 31.6 1.0
CZ D:ARG93 4.0 31.0 1.0
CG D:GLU89 4.2 35.0 1.0
CG1 C:VAL201 4.2 25.6 1.0
OE2 D:GLU89 4.2 37.2 1.0
HG13 C:VAL201 4.3 30.7 1.0
CG2 C:VAL201 4.4 26.7 1.0
HH12 D:ARG22 4.5 46.8 1.0
CD D:GLU89 4.5 36.0 1.0
CA D:GLU89 4.5 31.4 1.0
HG22 C:VAL201 4.5 32.1 1.0
N D:GLU89 4.6 31.1 1.0
CZ D:ARG22 4.6 39.2 1.0
HG12 D:ILE88 4.6 37.9 1.0
HB D:ILE88 4.7 36.4 1.0
HH11 D:ARG93 4.7 38.0 1.0
C D:ILE88 4.7 30.1 1.0
HD13 D:ILE88 4.7 38.6 1.0
O D:ILE88 4.7 30.0 1.0
HG2 D:GLU89 4.8 42.0 1.0
H D:GLU89 4.8 37.3 1.0
NH1 D:ARG22 4.9 39.0 1.0
HG12 C:VAL201 4.9 30.7 1.0
CB C:VAL201 4.9 26.7 1.0
CB D:ILE88 4.9 30.3 1.0
CB D:GLU89 5.0 33.4 1.0

Reference:

M.A.Arbing, S.Satagopan, V.A.Varaljay, A.Shin, F.R.Tabita. Structure Function Studies of R. Palustris Rubisco. To Be Published.
Page generated: Fri Jul 26 08:51:15 2024

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