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Chlorine in PDB 5hpf: Crystal Structure of the Double Mutant of Pobr Transcription Factor Inducer Binding Domain From Acinetobacter

Protein crystallography data

The structure of Crystal Structure of the Double Mutant of Pobr Transcription Factor Inducer Binding Domain From Acinetobacter, PDB code: 5hpf was solved by Y.Kim, C.Tesar, R.Jedrejczak, R.Jha, C.E.M.Strauss, A.Joachimiak, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.38 / 2.31
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 111.348, 111.348, 282.174, 90.00, 90.00, 90.00
R / Rfree (%) 17 / 21.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Double Mutant of Pobr Transcription Factor Inducer Binding Domain From Acinetobacter (pdb code 5hpf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Double Mutant of Pobr Transcription Factor Inducer Binding Domain From Acinetobacter, PDB code: 5hpf:

Chlorine binding site 1 out of 1 in 5hpf

Go back to Chlorine Binding Sites List in 5hpf
Chlorine binding site 1 out of 1 in the Crystal Structure of the Double Mutant of Pobr Transcription Factor Inducer Binding Domain From Acinetobacter


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Double Mutant of Pobr Transcription Factor Inducer Binding Domain From Acinetobacter within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:0.8
occ:1.00
ND1 B:HIS125 3.1 0.7 1.0
CB B:PRO155 3.5 74.0 1.0
O B:HIS125 3.6 64.8 1.0
ND1 B:HIS157 3.7 69.7 1.0
CA B:PRO155 3.9 63.0 1.0
CE1 B:HIS125 4.0 0.8 1.0
CG B:HIS125 4.0 90.8 1.0
CE1 B:HIS157 4.1 70.4 1.0
CB B:HIS125 4.2 75.1 1.0
N B:ALA156 4.3 65.8 1.0
C B:HIS125 4.6 70.6 1.0
C B:PRO155 4.6 61.7 1.0
CH2 B:TRP177 4.6 79.5 1.0
CD B:LYS184 4.8 0.6 1.0
CG B:LYS184 4.8 100.0 1.0
CG B:HIS157 4.9 68.4 1.0
CG B:PRO155 4.9 75.0 1.0
CZ2 B:TRP177 4.9 77.1 1.0
N B:HIS157 5.0 65.3 1.0
CA B:HIS125 5.0 75.1 1.0

Reference:

R.K.Jha, T.L.Kern, Y.Kim, C.Tesar, R.Jedrzejczak, A.Joachimiak, C.E.Strauss. A Microbial Sensor For Organophosphate Hydrolysis Exploiting An Engineered Specificity Switch in A Transcription Factor. Nucleic Acids Res. V. 44 8490 2016.
ISSN: ESSN 1362-4962
PubMed: 27536006
DOI: 10.1093/NAR/GKW687
Page generated: Fri Jul 26 08:57:51 2024

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