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Chlorine in PDB 5hzd: Rna Editing Tutase 1 From Trypanosoma Brucei

Protein crystallography data

The structure of Rna Editing Tutase 1 From Trypanosoma Brucei, PDB code: 5hzd was solved by S.Thore, L.T.Rajappa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.65 / 1.60
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 129.800, 58.130, 66.640, 90.00, 90.00, 90.00
R / Rfree (%) 16.6 / 20

Other elements in 5hzd:

The structure of Rna Editing Tutase 1 From Trypanosoma Brucei also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Rna Editing Tutase 1 From Trypanosoma Brucei (pdb code 5hzd). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Rna Editing Tutase 1 From Trypanosoma Brucei, PDB code: 5hzd:

Chlorine binding site 1 out of 1 in 5hzd

Go back to Chlorine Binding Sites List in 5hzd
Chlorine binding site 1 out of 1 in the Rna Editing Tutase 1 From Trypanosoma Brucei


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Rna Editing Tutase 1 From Trypanosoma Brucei within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl703

b:67.7
occ:1.00
O A:HOH1001 2.8 46.9 1.0
O A:HOH1184 3.5 20.9 1.0
N A:SER523 3.5 13.5 1.0
O A:HOH883 3.5 25.8 1.0
OG A:SER523 3.8 18.1 1.0
CB A:SER523 4.0 15.5 1.0
CB A:THR522 4.1 14.1 1.0
CA A:THR522 4.1 15.8 1.0
OD1 A:ASN514 4.3 22.8 1.0
C A:THR522 4.3 17.0 1.0
CA A:SER523 4.4 13.4 1.0
NZ A:LYS509 4.5 39.0 1.0
OG A:SER516 4.6 27.1 1.0
CG2 A:THR522 4.6 17.4 1.0

Reference:

L.Rajappa-Titu, T.Suematsu, P.Munoz-Tello, M.Long, O.Demir, K.J.Cheng, J.R.Stagno, H.Luecke, R.E.Amaro, I.Aphasizheva, R.Aphasizhev, S.Thore. Rna Editing Tutase 1: Structural Foundation of Substrate Recognition, Complex Interactions and Drug Targeting. Nucleic Acids Res. V. 44 10862 2016.
ISSN: ESSN 1362-4962
PubMed: 27744351
DOI: 10.1093/NAR/GKW917
Page generated: Sat Jul 12 02:55:52 2025

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