Atomistry » Chlorine » PDB 5i1t-5ibn » 5i4x
Atomistry »
  Chlorine »
    PDB 5i1t-5ibn »
      5i4x »

Chlorine in PDB 5i4x: Exploring Onset of Lysozyme Denaturation By Urea - Soak Period 2 Hours

Enzymatic activity of Exploring Onset of Lysozyme Denaturation By Urea - Soak Period 2 Hours

All present enzymatic activity of Exploring Onset of Lysozyme Denaturation By Urea - Soak Period 2 Hours:
3.2.1.17;

Protein crystallography data

The structure of Exploring Onset of Lysozyme Denaturation By Urea - Soak Period 2 Hours, PDB code: 5i4x was solved by M.V.Hosur, T.Raskar, S.Khavnekar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.73 / 1.61
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 78.840, 78.840, 36.840, 90.00, 90.00, 90.00
R / Rfree (%) 17.8 / 21.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Exploring Onset of Lysozyme Denaturation By Urea - Soak Period 2 Hours (pdb code 5i4x). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Exploring Onset of Lysozyme Denaturation By Urea - Soak Period 2 Hours, PDB code: 5i4x:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5i4x

Go back to Chlorine Binding Sites List in 5i4x
Chlorine binding site 1 out of 2 in the Exploring Onset of Lysozyme Denaturation By Urea - Soak Period 2 Hours


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Exploring Onset of Lysozyme Denaturation By Urea - Soak Period 2 Hours within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl208

b:19.8
occ:0.46
O A:URE205 3.3 22.3 1.0
N A:GLY71 3.3 22.1 1.0
CA A:PRO70 3.8 18.4 1.0
O A:HOH419 3.8 32.7 1.0
O A:HOH329 3.9 30.1 1.0
N1 A:URE205 3.9 17.9 1.0
C A:URE205 4.0 19.9 1.0
C A:PRO70 4.1 18.8 1.0
CA A:GLY71 4.2 22.1 1.0
CB A:PRO70 4.6 21.2 1.0
O A:HOH394 4.7 25.0 1.0
O A:THR69 4.8 16.9 1.0
N A:PRO70 4.9 16.6 1.0

Chlorine binding site 2 out of 2 in 5i4x

Go back to Chlorine Binding Sites List in 5i4x
Chlorine binding site 2 out of 2 in the Exploring Onset of Lysozyme Denaturation By Urea - Soak Period 2 Hours


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Exploring Onset of Lysozyme Denaturation By Urea - Soak Period 2 Hours within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl209

b:22.9
occ:1.00
N1 A:URE203 3.3 22.1 1.0
O A:HOH325 3.4 29.6 1.0
N2 A:URE203 3.5 20.1 1.0
O A:HOH328 3.6 19.9 1.0
CA A:GLU7 3.7 15.7 1.0
CG A:GLU7 3.8 14.6 1.0
C A:URE203 3.9 20.4 1.0
O A:HOH415 3.9 37.6 1.0
CB A:GLU7 4.0 14.2 1.0
N A:GLU7 4.5 14.0 1.0
CB A:ALA10 4.6 15.3 1.0
O A:GLU7 4.6 14.9 1.0
C A:GLU7 4.7 12.9 1.0
O A:CYS6 4.8 13.2 1.0
C A:CYS6 4.9 12.1 1.0
CD A:GLU7 5.0 17.2 1.0

Reference:

T.Raskar, S.Khavnekar, M.Hosur. Time-Dependent X-Ray Diffraction Studies on Urea/Hen Egg White Lysozyme Complexes Reveal Structural Changes That Indicate Onset of Denaturation Sci Rep V. 6 32277 2016.
ISSN: ESSN 2045-2322
PubMed: 27573790
DOI: 10.1038/SREP32277
Page generated: Sat Jul 12 02:59:21 2025

Last articles

Mg in 3SHY
Mg in 3SEP
Mg in 3SHS
Mg in 3SHQ
Mg in 3SH1
Mg in 3SFU
Mg in 3SE7
Mg in 3SFG
Mg in 3SDI
Mg in 3SF0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy