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Chlorine in PDB 5iqj: 1.9 Angstrom Crystal Structure of Protein with Unknown Function From Vibrio Cholerae.

Protein crystallography data

The structure of 1.9 Angstrom Crystal Structure of Protein with Unknown Function From Vibrio Cholerae., PDB code: 5iqj was solved by G.Minasov, Z.Wawrzak, P.J.Stogios, T.Skarina, K.D.Seed, V.Yim, A.Savchenko, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.41 / 1.90
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 45.126, 149.512, 159.966, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 22.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 1.9 Angstrom Crystal Structure of Protein with Unknown Function From Vibrio Cholerae. (pdb code 5iqj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the 1.9 Angstrom Crystal Structure of Protein with Unknown Function From Vibrio Cholerae., PDB code: 5iqj:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 5iqj

Go back to Chlorine Binding Sites List in 5iqj
Chlorine binding site 1 out of 4 in the 1.9 Angstrom Crystal Structure of Protein with Unknown Function From Vibrio Cholerae.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 1.9 Angstrom Crystal Structure of Protein with Unknown Function From Vibrio Cholerae. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:55.1
occ:1.00
O A:HOH404 2.7 52.2 1.0
O A:HOH327 2.9 39.8 1.0
OG1 A:THR25 3.0 26.0 1.0
N A:THR25 3.3 27.6 1.0
O A:THR25 3.5 26.8 1.0
NE2 A:GLN19 3.5 34.0 1.0
O A:HOH365 3.7 53.1 1.0
CG A:GLN19 3.9 27.8 1.0
CA A:THR25 3.9 26.4 1.0
CB A:THR25 3.9 25.6 1.0
O A:HOH324 4.0 41.6 1.0
C A:THR25 4.0 27.0 1.0
O B:HOH343 4.2 42.5 1.0
OD1 A:ASN24 4.2 38.6 1.0
CD A:GLN19 4.2 29.7 1.0
C A:ASN24 4.2 28.1 1.0
O A:PHE23 4.3 26.1 1.0
CA A:ASN24 4.4 30.0 1.0
CG2 A:THR25 4.4 25.2 1.0
O A:HOH319 4.6 32.8 1.0
CG A:ASN24 4.9 35.6 1.0
CB A:GLN19 5.0 26.1 1.0

Chlorine binding site 2 out of 4 in 5iqj

Go back to Chlorine Binding Sites List in 5iqj
Chlorine binding site 2 out of 4 in the 1.9 Angstrom Crystal Structure of Protein with Unknown Function From Vibrio Cholerae.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 1.9 Angstrom Crystal Structure of Protein with Unknown Function From Vibrio Cholerae. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:79.2
occ:1.00
O A:HOH400 3.1 59.9 1.0
OE1 A:GLN19 3.9 30.4 1.0
CB A:GLN19 3.9 26.1 1.0
CG2 A:VAL20 4.4 28.8 1.0
CD A:GLN19 4.4 29.7 1.0
N A:VAL20 4.7 25.5 1.0
CG A:GLN19 4.7 27.8 1.0
C A:GLN19 4.8 26.2 1.0
O A:VAL16 4.9 23.5 1.0
CG1 A:VAL16 4.9 25.1 1.0
O A:HOH312 4.9 30.4 0.5
CA A:GLN19 5.0 25.3 1.0

Chlorine binding site 3 out of 4 in 5iqj

Go back to Chlorine Binding Sites List in 5iqj
Chlorine binding site 3 out of 4 in the 1.9 Angstrom Crystal Structure of Protein with Unknown Function From Vibrio Cholerae.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of 1.9 Angstrom Crystal Structure of Protein with Unknown Function From Vibrio Cholerae. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl201

b:69.5
occ:1.00
O B:HOH326 3.5 32.2 1.0
O B:HOH310 4.6 49.6 1.0
OG1 B:THR27 4.6 24.1 1.0
O B:HOH418 4.9 38.1 1.0

Chlorine binding site 4 out of 4 in 5iqj

Go back to Chlorine Binding Sites List in 5iqj
Chlorine binding site 4 out of 4 in the 1.9 Angstrom Crystal Structure of Protein with Unknown Function From Vibrio Cholerae.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of 1.9 Angstrom Crystal Structure of Protein with Unknown Function From Vibrio Cholerae. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl202

b:55.6
occ:1.00
O B:HOH336 2.9 36.2 1.0
OG1 B:THR25 3.2 24.9 1.0
NE2 B:GLN19 3.6 32.6 1.0
N B:THR25 3.6 23.6 1.0
O B:THR25 3.7 24.5 1.0
CG B:GLN19 4.1 26.9 1.0
CB B:THR25 4.2 23.9 1.0
CA B:THR25 4.2 23.1 1.0
C B:THR25 4.3 24.4 1.0
CD B:GLN19 4.3 29.7 1.0
OD1 B:ASN24 4.4 38.5 1.0
C B:ASN24 4.5 23.9 1.0
O B:PHE23 4.5 24.8 1.0
O B:HOH340 4.5 28.6 1.0
CA B:ASN24 4.5 27.0 1.0
CG2 B:THR25 4.6 23.2 1.0
O B:HOH339 4.7 48.6 1.0

Reference:

G.Minasov, Z.Wawrzak, P.J.Stogios, T.Skarina, K.D.Seed, V.Yim, A.Savchenko, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases. 1.9 Angstrom Crystal Structure of Protein with Unknown Function From Vibrio Cholerae. To Be Published.
Page generated: Fri Jul 26 09:32:40 2024

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