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Chlorine in PDB 5jh3: Human Cathepsin K Mutant C25S

Enzymatic activity of Human Cathepsin K Mutant C25S

All present enzymatic activity of Human Cathepsin K Mutant C25S:
3.4.22.38;

Protein crystallography data

The structure of Human Cathepsin K Mutant C25S, PDB code: 5jh3 was solved by M.Novinec, M.Korenc, B.Lenarcic, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.80 / 1.75
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 56.850, 56.850, 130.080, 90.00, 90.00, 90.00
R / Rfree (%) 18.7 / 21.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human Cathepsin K Mutant C25S (pdb code 5jh3). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Human Cathepsin K Mutant C25S, PDB code: 5jh3:

Chlorine binding site 1 out of 1 in 5jh3

Go back to Chlorine Binding Sites List in 5jh3
Chlorine binding site 1 out of 1 in the Human Cathepsin K Mutant C25S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human Cathepsin K Mutant C25S within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:61.1
occ:1.00
O A:HOH594 2.8 40.7 1.0
NZ A:LYS122 3.3 48.6 1.0
OD2 A:ASP3 3.7 53.6 1.0
NH1 A:ARG198 3.7 26.1 1.0
NZ A:LYS176 3.7 43.3 1.0
ND2 A:ASN199 4.1 31.5 1.0
O A:HOH468 4.2 44.5 1.0
CD A:LYS122 4.3 33.8 1.0
CE A:LYS122 4.4 42.5 1.0
CE A:LYS176 4.5 38.0 1.0
O A:HOH473 4.6 29.4 1.0
CZ A:ARG198 4.7 29.9 1.0
CD A:LYS176 4.8 35.0 1.0
O A:HOH434 4.9 38.7 1.0
CG A:ASP3 4.9 49.1 1.0
NH2 A:ARG198 4.9 25.8 1.0

Reference:

M.Novinec, M.Rebernik, B.Lenarcic. An Allosteric Site Enables Fine-Tuning of Cathepsin K By Diverse Effectors. Febs Lett. V. 590 4507 2016.
ISSN: ISSN 1873-3468
PubMed: 27859061
DOI: 10.1002/1873-3468.12495
Page generated: Sat Jul 12 03:37:47 2025

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