Atomistry » Chlorine » PDB 5kgg-5kp3 » 5kkk
Atomistry »
  Chlorine »
    PDB 5kgg-5kp3 »
      5kkk »

Chlorine in PDB 5kkk: 1.7-Angstrom in Situ Mylar Structure of Sperm Whale Myoglobin (Swmb- Co) at 100 K

Protein crystallography data

The structure of 1.7-Angstrom in Situ Mylar Structure of Sperm Whale Myoglobin (Swmb- Co) at 100 K, PDB code: 5kkk was solved by J.Broecker, O.P.Ernst, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.91 / 1.70
Space group P 6
Cell size a, b, c (Å), α, β, γ (°) 90.770, 90.770, 45.671, 90.00, 90.00, 120.00
R / Rfree (%) 17.6 / 21.5

Other elements in 5kkk:

The structure of 1.7-Angstrom in Situ Mylar Structure of Sperm Whale Myoglobin (Swmb- Co) at 100 K also contains other interesting chemical elements:

Iron (Fe) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 1.7-Angstrom in Situ Mylar Structure of Sperm Whale Myoglobin (Swmb- Co) at 100 K (pdb code 5kkk). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the 1.7-Angstrom in Situ Mylar Structure of Sperm Whale Myoglobin (Swmb- Co) at 100 K, PDB code: 5kkk:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5kkk

Go back to Chlorine Binding Sites List in 5kkk
Chlorine binding site 1 out of 2 in the 1.7-Angstrom in Situ Mylar Structure of Sperm Whale Myoglobin (Swmb- Co) at 100 K


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 1.7-Angstrom in Situ Mylar Structure of Sperm Whale Myoglobin (Swmb- Co) at 100 K within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl208

b:39.4
occ:0.33
NZ A:LYS17 4.1 30.8 1.0
CB A:ALA16 4.7 19.4 1.0

Chlorine binding site 2 out of 2 in 5kkk

Go back to Chlorine Binding Sites List in 5kkk
Chlorine binding site 2 out of 2 in the 1.7-Angstrom in Situ Mylar Structure of Sperm Whale Myoglobin (Swmb- Co) at 100 K


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 1.7-Angstrom in Situ Mylar Structure of Sperm Whale Myoglobin (Swmb- Co) at 100 K within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl209

b:60.6
occ:1.00
O A:HOH311 3.4 36.9 1.0
NZ A:LYS63 3.8 40.9 1.0
O A:HOH402 3.9 36.9 1.0
O A:HOH321 4.0 54.1 1.0
NE2 A:GLN27 4.0 25.4 1.0
OE1 A:GLN27 4.4 24.4 1.0
CD A:LYS63 4.4 28.8 1.0
CD A:GLN27 4.6 25.2 1.0
O A:LYS57 4.7 30.3 1.0
CE A:LYS63 4.7 44.7 1.0

Reference:

J.Broecker, V.Klingel, W.L.Ou, A.R.Balo, D.J.Kissick, C.M.Ogata, A.Kuo, O.P.Ernst. A Versatile System For High-Throughput in Situ X-Ray Screening and Data Collection of Soluble and Membrane-Protein Crystals. Cryst Growth Des V. 16 6318 2016.
ISSN: ISSN 1528-7483
PubMed: 28261000
DOI: 10.1021/ACS.CGD.6B00950
Page generated: Sat Jul 12 04:06:06 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy