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Chlorine in PDB 5l3x: Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac

Protein crystallography data

The structure of Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac, PDB code: 5l3x was solved by D.Poellmann, S.M.Vos, P.Cramer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.27 / 2.75
Space group I 21 3
Cell size a, b, c (Å), α, β, γ (°) 185.070, 185.070, 185.070, 90.00, 90.00, 90.00
R / Rfree (%) 23.7 / 25.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac (pdb code 5l3x). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac, PDB code: 5l3x:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5l3x

Go back to Chlorine Binding Sites List in 5l3x
Chlorine binding site 1 out of 2 in the Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl601

b:0.6
occ:1.00
O B:TYR545 3.8 94.2 1.0
CZ B:PHE586 4.0 91.1 1.0
NE2 B:HIS581 4.1 0.1 1.0
CB B:PRO544 4.1 92.3 1.0
N B:TYR545 4.1 94.4 1.0
CA B:PRO544 4.3 90.7 1.0
CE2 B:PHE586 4.3 93.7 1.0
CB B:ASN585 4.5 0.5 1.0
ND2 B:ASN585 4.6 0.6 1.0
CE1 B:HIS581 4.6 0.2 1.0
C B:PRO544 4.7 92.9 1.0
C B:TYR545 4.8 90.9 1.0
CE1 B:PHE586 4.8 91.2 1.0
CG B:ASN585 4.9 0.6 1.0

Chlorine binding site 2 out of 2 in 5l3x

Go back to Chlorine Binding Sites List in 5l3x
Chlorine binding site 2 out of 2 in the Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Negative Elongation Factor Subcomplex Nelf-Ac within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl602

b:83.3
occ:1.00
ND1 B:HIS462 4.0 67.7 1.0
CD2 A:LEU149 4.3 57.8 1.0
CG B:PRO421 4.5 62.0 1.0
CD1 A:LEU156 4.6 67.2 1.0
O B:CYS461 4.7 70.6 1.0
CE1 B:HIS462 4.8 65.0 1.0
CA B:HIS462 4.9 69.0 1.0
CG B:HIS462 4.9 67.5 1.0
O A:LEU144 5.0 66.7 1.0
CB B:HIS462 5.0 67.8 1.0

Reference:

S.M.Vos, D.Pollmann, L.Caizzi, K.B.Hofmann, P.Rombaut, T.Zimniak, F.Herzog, P.Cramer. Architecture and Rna Binding of the Human Negative Elongation Factor. Elife V. 5 2016.
ISSN: ESSN 2050-084X
PubMed: 27282391
DOI: 10.7554/ELIFE.14981
Page generated: Fri Jul 26 11:02:05 2024

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