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Chlorine in PDB 5lhm: Crystal Structure of Safc From Myxococcus Xanthus Apo-Form

Protein crystallography data

The structure of Crystal Structure of Safc From Myxococcus Xanthus Apo-Form, PDB code: 5lhm was solved by S.Gerhardt, J.Netzer, O.Einsle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.18 / 1.31
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 64.558, 64.558, 118.163, 90.00, 90.00, 120.00
R / Rfree (%) 17.7 / 19.6

Other elements in 5lhm:

The structure of Crystal Structure of Safc From Myxococcus Xanthus Apo-Form also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Safc From Myxococcus Xanthus Apo-Form (pdb code 5lhm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Safc From Myxococcus Xanthus Apo-Form, PDB code: 5lhm:

Chlorine binding site 1 out of 1 in 5lhm

Go back to Chlorine Binding Sites List in 5lhm
Chlorine binding site 1 out of 1 in the Crystal Structure of Safc From Myxococcus Xanthus Apo-Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Safc From Myxococcus Xanthus Apo-Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1003

b:36.5
occ:1.00
NH1 A:ARG218 3.1 17.6 1.0
N A:LYS221 3.1 20.6 1.0
NH2 A:ARG218 3.5 23.9 1.0
CA A:ARG220 3.8 14.3 1.0
CZ A:ARG218 3.8 20.9 1.0
CB A:LYS221 3.8 24.4 1.0
CG A:LYS221 3.9 32.7 1.0
CB A:ARG220 4.0 12.9 1.0
C A:ARG220 4.0 19.2 1.0
CA A:LYS221 4.0 22.3 1.0
O A:LYS221 4.1 34.1 1.0
CG A:ARG220 4.3 13.4 1.0
C A:LYS221 4.6 31.8 1.0
CD A:LYS221 4.7 40.8 1.0

Reference:

J.Siegrist, J.Netzer, S.Mordhorst, L.Karst, S.Gerhardt, O.Einsle, M.Richter, J.N.Andexer. Functional and Structural Characterisation of A Bacterial O-Methyltransferase and Factors Determining Regioselectivity. Febs Lett. V. 591 312 2017.
ISSN: ISSN 1873-3468
PubMed: 27990630
DOI: 10.1002/1873-3468.12530
Page generated: Sat Jul 12 04:57:02 2025

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