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Chlorine in PDB 5ltr: Structure of the Yellow-Green Fluorescent Protein Mneongreen From Branchiostoma Lanceolatum at the Near Physiological pH 8.0

Protein crystallography data

The structure of Structure of the Yellow-Green Fluorescent Protein Mneongreen From Branchiostoma Lanceolatum at the Near Physiological pH 8.0, PDB code: 5ltr was solved by D.Clavel, G.Gotthard, A.Royant, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.56 / 1.21
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 72.270, 72.270, 153.970, 90.00, 90.00, 120.00
R / Rfree (%) 15.8 / 18.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Yellow-Green Fluorescent Protein Mneongreen From Branchiostoma Lanceolatum at the Near Physiological pH 8.0 (pdb code 5ltr). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of the Yellow-Green Fluorescent Protein Mneongreen From Branchiostoma Lanceolatum at the Near Physiological pH 8.0, PDB code: 5ltr:

Chlorine binding site 1 out of 1 in 5ltr

Go back to Chlorine Binding Sites List in 5ltr
Chlorine binding site 1 out of 1 in the Structure of the Yellow-Green Fluorescent Protein Mneongreen From Branchiostoma Lanceolatum at the Near Physiological pH 8.0


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Yellow-Green Fluorescent Protein Mneongreen From Branchiostoma Lanceolatum at the Near Physiological pH 8.0 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:11.7
occ:0.30
O A:HOH507 0.6 16.9 0.7
OQ2 A:KCX143 2.3 17.8 0.7
O A:HOH411 2.3 16.1 0.7
OH A:TYR175 2.9 15.9 1.0
OG A:SER153 3.2 15.6 0.3
NE2 A:HIS62 3.4 12.2 1.0
CX A:KCX143 3.4 15.7 0.7
NH2 A:ARG88 3.4 10.7 1.0
OG1 A:THR173 3.7 13.6 1.0
OG A:SER153 3.7 17.1 0.7
OQ1 A:KCX143 3.8 19.6 0.7
CB A:THR173 3.9 11.3 1.0
CD2 A:CR259 4.0 9.6 1.0
CB A:SER153 4.0 13.2 0.7
CZ A:TYR175 4.0 13.3 1.0
CG2 A:THR173 4.0 12.0 1.0
CE2 A:PHE155 4.2 12.2 1.0
CB A:SER153 4.2 14.8 0.3
CD2 A:HIS62 4.2 11.8 1.0
NE A:ARG88 4.2 11.3 1.0
CE1 A:TYR175 4.3 13.1 1.0
CE1 A:HIS62 4.3 11.1 1.0
CZ A:ARG88 4.3 10.5 1.0
CB2 A:CR259 4.3 10.1 1.0
NZ A:KCX143 4.5 14.1 0.7
O A:HOH414 4.6 17.8 1.0
NZ A:KCX143 4.6 15.1 0.3
CG2 A:CR259 4.7 9.2 1.0
O A:HOH460 4.7 13.4 1.0
CD2 A:PHE155 4.8 11.6 1.0
NH1 A:ARG195 4.8 10.9 1.0
CE2 A:CR259 4.9 10.3 1.0
O2 A:CR259 4.9 10.0 1.0

Reference:

D.Clavel, G.Gotthard, D.Von Stetten, D.De Sanctis, H.Pasquier, G.G.Lambert, N.C.Shaner, A.Royant. Structural Analysis of the Bright Monomeric Yellow-Green Fluorescent Protein Mneongreen Obtained By Directed Evolution. Acta Crystallogr D Struct V. 72 1298 2016BIOL.
ISSN: ISSN 2059-7983
PubMed: 27917830
DOI: 10.1107/S2059798316018623
Page generated: Fri Jul 26 12:11:00 2024

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