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Chlorine in PDB 5mug: Self-Assembled Alpha-Tocopherol Transfer Protein Nanoparticles Promote Vitamin E Delivery Across An Endothelial Barrier

Protein crystallography data

The structure of Self-Assembled Alpha-Tocopherol Transfer Protein Nanoparticles Promote Vitamin E Delivery Across An Endothelial Barrier, PDB code: 5mug was solved by A.Stocker, W.Aeschimann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.57 / 2.42
Space group I 4 3 2
Cell size a, b, c (Å), α, β, γ (°) 168.259, 168.259, 168.259, 90.00, 90.00, 90.00
R / Rfree (%) 19.1 / 21.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Self-Assembled Alpha-Tocopherol Transfer Protein Nanoparticles Promote Vitamin E Delivery Across An Endothelial Barrier (pdb code 5mug). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Self-Assembled Alpha-Tocopherol Transfer Protein Nanoparticles Promote Vitamin E Delivery Across An Endothelial Barrier, PDB code: 5mug:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5mug

Go back to Chlorine Binding Sites List in 5mug
Chlorine binding site 1 out of 2 in the Self-Assembled Alpha-Tocopherol Transfer Protein Nanoparticles Promote Vitamin E Delivery Across An Endothelial Barrier


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Self-Assembled Alpha-Tocopherol Transfer Protein Nanoparticles Promote Vitamin E Delivery Across An Endothelial Barrier within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:0.4
occ:1.00
CE1 A:HIS225 3.4 64.1 1.0
ND1 A:HIS225 3.7 65.6 1.0
NE2 A:HIS236 3.9 67.2 1.0
CD2 A:HIS223 4.2 59.4 1.0
CE1 A:HIS236 4.2 64.6 1.0
CB A:SER232 4.4 72.6 1.0
NE2 A:HIS225 4.4 61.3 1.0
CB A:HIS223 4.5 57.0 1.0
OG A:SER232 4.6 77.6 1.0
CG A:HIS223 4.6 57.2 1.0
CG A:HIS225 4.9 63.5 1.0
CD2 A:HIS236 4.9 65.6 1.0

Chlorine binding site 2 out of 2 in 5mug

Go back to Chlorine Binding Sites List in 5mug
Chlorine binding site 2 out of 2 in the Self-Assembled Alpha-Tocopherol Transfer Protein Nanoparticles Promote Vitamin E Delivery Across An Endothelial Barrier


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Self-Assembled Alpha-Tocopherol Transfer Protein Nanoparticles Promote Vitamin E Delivery Across An Endothelial Barrier within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:89.2
occ:1.00
O A:HOH402 2.2 73.8 1.0
NH2 A:ARG134 3.9 57.6 0.5
N A:SER84 4.2 96.7 1.0
OG A:SER84 4.3 93.0 1.0
O A:HOH432 4.3 70.6 1.0
O A:GLU82 4.4 0.9 1.0
CB A:SER84 4.5 96.7 1.0
CA A:ILE83 4.7 96.5 1.0
NH2 A:ARG134 4.7 58.5 0.5
CB A:TYR130 4.9 69.6 1.0
C A:ILE83 4.9 96.2 1.0

Reference:

W.Aeschimann, S.Staats, S.Kammer, N.Olieric, J.M.Jeckelmann, D.Fotiadis, T.Netscher, G.Rimbach, M.Cascella, A.Stocker. Self-Assembled Alpha-Tocopherol Transfer Protein Nanoparticles Promote Vitamin E Delivery Across An Endothelial Barrier. Sci Rep V. 7 4970 2017.
ISSN: ESSN 2045-2322
PubMed: 28694484
DOI: 10.1038/S41598-017-05148-9
Page generated: Fri Jul 26 12:56:21 2024

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