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Chlorine in PDB 5mx1: Crystal Structure of Human Chondroadherin

Protein crystallography data

The structure of Crystal Structure of Human Chondroadherin, PDB code: 5mx1 was solved by P.Paracuellos, E.Hohenester, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 58.35 / 2.17
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 215.450, 60.700, 57.660, 90.00, 100.60, 90.00
R / Rfree (%) 18.8 / 24

Other elements in 5mx1:

The structure of Crystal Structure of Human Chondroadherin also contains other interesting chemical elements:

Nickel (Ni) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human Chondroadherin (pdb code 5mx1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Human Chondroadherin, PDB code: 5mx1:

Chlorine binding site 1 out of 1 in 5mx1

Go back to Chlorine Binding Sites List in 5mx1
Chlorine binding site 1 out of 1 in the Crystal Structure of Human Chondroadherin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Chondroadherin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:53.9
occ:1.00
NI A:NI402 3.0 61.1 1.0
O A:HOH643 3.4 35.1 1.0
HA A:HIS30 3.5 38.5 1.0
HE1 A:HIS28 3.6 78.1 1.0
ND1 A:HIS30 3.6 53.5 1.0
HZ1 B:LYS171 3.7 93.8 1.0
O A:CYS29 3.9 32.3 1.0
HB3 A:HIS30 3.9 47.3 1.0
O A:HOH668 3.9 54.3 1.0
HZ2 B:LYS171 4.1 93.8 1.0
NZ B:LYS171 4.3 78.2 1.0
CE1 A:HIS28 4.3 65.1 1.0
CA A:HIS30 4.3 32.1 1.0
HE3 B:LYS171 4.3 93.5 1.0
CB A:HIS30 4.4 39.4 1.0
CG A:HIS30 4.4 48.4 1.0
H A:SER31 4.5 44.2 1.0
CE1 A:HIS30 4.6 55.9 1.0
HE1 A:HIS30 4.7 67.1 1.0
HD22 B:ASN148 4.8 40.6 1.0
C A:CYS29 4.9 29.7 1.0
OD1 B:ASP172 4.9 46.5 1.0
CE B:LYS171 4.9 77.9 1.0
HE2 A:HIS28 4.9 78.7 1.0

Reference:

P.Paracuellos, S.Kalamajski, A.Bonna, D.Bihan, R.W.Farndale, E.Hohenester. Structural and Functional Analysis of Two Small Leucine-Rich Repeat Proteoglycans, Fibromodulin and Chondroadherin. Matrix Biol. V. 63 106 2017.
ISSN: ISSN 1569-1802
PubMed: 28215822
DOI: 10.1016/J.MATBIO.2017.02.002
Page generated: Fri Jul 26 13:00:59 2024

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