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Chlorine in PDB 5nak: Pseudomonas Fluorescens Kynurenine 3-Monooxygenase (Kmo) in Complex with the Enzyme Substrate L-Kynurenine

Enzymatic activity of Pseudomonas Fluorescens Kynurenine 3-Monooxygenase (Kmo) in Complex with the Enzyme Substrate L-Kynurenine

All present enzymatic activity of Pseudomonas Fluorescens Kynurenine 3-Monooxygenase (Kmo) in Complex with the Enzyme Substrate L-Kynurenine:
1.14.13.9;

Protein crystallography data

The structure of Pseudomonas Fluorescens Kynurenine 3-Monooxygenase (Kmo) in Complex with the Enzyme Substrate L-Kynurenine, PDB code: 5nak was solved by M.Taylor, C.G.Mowat, P.Rowland, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 67.48 / 1.50
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 69.930, 52.620, 137.990, 90.00, 104.07, 90.00
R / Rfree (%) 18.9 / 21

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Pseudomonas Fluorescens Kynurenine 3-Monooxygenase (Kmo) in Complex with the Enzyme Substrate L-Kynurenine (pdb code 5nak). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Pseudomonas Fluorescens Kynurenine 3-Monooxygenase (Kmo) in Complex with the Enzyme Substrate L-Kynurenine, PDB code: 5nak:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5nak

Go back to Chlorine Binding Sites List in 5nak
Chlorine binding site 1 out of 2 in the Pseudomonas Fluorescens Kynurenine 3-Monooxygenase (Kmo) in Complex with the Enzyme Substrate L-Kynurenine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pseudomonas Fluorescens Kynurenine 3-Monooxygenase (Kmo) in Complex with the Enzyme Substrate L-Kynurenine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:17.6
occ:1.00
O A:HOH832 3.0 16.4 1.0
N A:GLY323 3.2 13.5 1.0
C10 A:FAD501 3.3 14.3 1.0
N10 A:FAD501 3.3 15.5 1.0
O A:HOH849 3.3 17.9 1.0
CA A:PRO318 3.4 14.8 1.0
N A:GLN322 3.4 14.1 1.0
N1 A:FAD501 3.5 13.4 1.0
C1' A:FAD501 3.6 15.1 1.0
O A:PRO318 3.7 20.1 1.0
CA A:GLY323 3.8 13.0 1.0
C9A A:FAD501 3.8 19.1 1.0
CA A:GLY321 3.8 14.8 1.0
C4X A:FAD501 3.9 17.4 1.0
C A:PRO318 3.9 19.7 1.0
CB A:PRO318 3.9 16.7 1.0
N A:GLY321 4.0 14.3 1.0
C A:GLY321 4.0 16.3 1.0
C2 A:FAD501 4.2 15.5 1.0
C A:GLN322 4.2 15.5 1.0
O A:VAL317 4.2 16.9 1.0
C5X A:FAD501 4.3 19.4 1.0
CA A:GLN322 4.3 13.8 1.0
N5 A:FAD501 4.3 20.6 1.0
N A:PRO318 4.5 15.1 1.0
C9 A:FAD501 4.6 19.0 1.0
C4 A:FAD501 4.6 15.4 1.0
N3 A:FAD501 4.7 15.3 1.0
C A:VAL317 4.7 17.3 1.0
CG A:MET316 4.8 14.8 1.0
O2 A:FAD501 4.8 16.1 1.0
SD A:MET316 4.9 16.0 1.0
N A:PHE319 5.0 16.6 1.0

Chlorine binding site 2 out of 2 in 5nak

Go back to Chlorine Binding Sites List in 5nak
Chlorine binding site 2 out of 2 in the Pseudomonas Fluorescens Kynurenine 3-Monooxygenase (Kmo) in Complex with the Enzyme Substrate L-Kynurenine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Pseudomonas Fluorescens Kynurenine 3-Monooxygenase (Kmo) in Complex with the Enzyme Substrate L-Kynurenine within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl502

b:20.7
occ:1.00
O B:HOH856 3.1 24.2 1.0
N B:GLY323 3.1 16.5 1.0
C10 B:FAD501 3.2 15.4 1.0
O B:HOH826 3.3 18.3 1.0
N10 B:FAD501 3.3 16.0 1.0
CA B:PRO318 3.4 20.2 1.0
N B:GLN322 3.4 19.1 1.0
N1 B:FAD501 3.4 15.0 1.0
C1' B:FAD501 3.6 15.9 1.0
O B:PRO318 3.7 26.0 1.0
CA B:GLY321 3.8 19.6 1.0
CA B:GLY323 3.8 15.8 1.0
C4X B:FAD501 3.8 17.7 1.0
C B:PRO318 3.9 25.0 1.0
CB B:PRO318 3.9 21.7 1.0
C9A B:FAD501 3.9 17.4 1.0
N B:GLY321 3.9 18.4 1.0
C B:GLY321 3.9 21.4 1.0
C2 B:FAD501 4.1 14.9 1.0
C B:GLN322 4.1 19.6 1.0
O B:VAL317 4.2 20.0 1.0
CA B:GLN322 4.3 18.5 1.0
C5X B:FAD501 4.3 16.5 1.0
N5 B:FAD501 4.3 18.1 1.0
N B:PRO318 4.5 19.5 1.0
C4 B:FAD501 4.5 17.3 1.0
N3 B:FAD501 4.6 15.2 1.0
C9 B:FAD501 4.6 17.6 1.0
O2 B:FAD501 4.7 15.6 1.0
C B:VAL317 4.7 20.9 1.0
CG B:MET316 4.8 18.2 1.0
N B:PHE319 4.9 21.1 1.0
SD B:MET316 5.0 19.9 1.0
C B:HIS320 5.0 22.5 1.0

Reference:

J.P.Hutchinson, P.Rowland, M.R.D.Taylor, E.M.Christodoulou, C.Haslam, C.I.Hobbs, D.S.Holmes, P.Homes, J.Liddle, D.J.Mole, I.Uings, A.L.Walker, S.P.Webster, C.G.Mowat, C.W.Chung. Structural and Mechanistic Basis of Differentiated Inhibitors of the Acute Pancreatitis Target Kynurenine-3-Monooxygenase. Nat Commun V. 8 15827 2017.
ISSN: ESSN 2041-1723
PubMed: 28604669
DOI: 10.1038/NCOMMS15827
Page generated: Fri Jul 26 13:22:30 2024

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