Atomistry » Chlorine » PDB 5nz7-5o5t » 5o5r
Atomistry »
  Chlorine »
    PDB 5nz7-5o5t »
      5o5r »

Chlorine in PDB 5o5r: X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023

Enzymatic activity of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023

All present enzymatic activity of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023:
3.4.17.21;

Protein crystallography data

The structure of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023, PDB code: 5o5r was solved by L.Motlova, Z.Novakova, C.Barinka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.13 / 1.65
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 101.512, 130.203, 159.160, 90.00, 90.00, 90.00
R / Rfree (%) 12.4 / 16

Other elements in 5o5r:

The structure of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023 also contains other interesting chemical elements:

Fluorine (F) 1 atom
Zinc (Zn) 2 atoms
Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023 (pdb code 5o5r). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023, PDB code: 5o5r:

Chlorine binding site 1 out of 1 in 5o5r

Go back to Chlorine Binding Sites List in 5o5r
Chlorine binding site 1 out of 1 in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl820

b:31.2
occ:1.00
 O A:HOH969 3.2 28.8 1.0
N A:ASP453 3.3 28.8 1.0
ND2 A:ASN451 3.3 25.0 1.0
NH1 A:ARG534 3.4 29.0 1.0
NE A:ARG534 3.4 32.2 1.0
NH2 A:ARG536 3.5 29.3 1.0
CB A:ASP453 3.7 27.1 1.0
CA A:ASP453 3.8 27.9 1.0
CZ A:ARG534 3.9 32.2 1.0
NH2 A:ARG580 4.0 28.3 1.0
C A:ASP453 4.0 25.6 1.0
CB A:ARG534 4.0 25.7 1.0
O A:ASP453 4.2 29.0 1.0
CB A:ASN451 4.2 23.7 1.0
CG A:ASN451 4.2 26.0 1.0
NE A:ARG536 4.3 29.8 1.0
N A:ALA452 4.3 24.9 1.0
CZ A:ARG536 4.3 28.7 1.0
C A:ALA452 4.3 27.2 1.0
C A:ASN451 4.4 26.9 1.0
CA A:ALA452 4.4 26.5 1.0
O A:SER454 4.4 28.5 1.0
O A:ASN451 4.5 29.9 1.0
N A:SER454 4.6 25.5 1.0
CD A:ARG534 4.6 29.9 1.0
CG A:ARG534 4.6 28.4 1.0
CZ A:ARG580 4.8 28.0 1.0
O A:ALA535 4.9 26.8 1.0
CA A:ARG534 5.0 25.9 1.0

Reference:

L.Motlova, Z.Novakova, C.Barinka. X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023 To Be Published.
Page generated: Sat Jul 12 06:33:13 2025

Last articles

Mg in 1KP8
Mg in 1KVK
Mg in 1KV8
Mg in 1KUV
Mg in 1KSZ
Mg in 1KSJ
Mg in 1KSH
Mg in 1KSG
Mg in 1KQP
Mg in 1KSF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy