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Chlorine in PDB 5pa8: Crystal Structure of Factor Viia in Complex with Cyclohexanamine

Enzymatic activity of Crystal Structure of Factor Viia in Complex with Cyclohexanamine

All present enzymatic activity of Crystal Structure of Factor Viia in Complex with Cyclohexanamine:
3.4.21.21;

Protein crystallography data

The structure of Crystal Structure of Factor Viia in Complex with Cyclohexanamine, PDB code: 5pa8 was solved by M.Stihle, A.Mayweg, S.Roever, M.G.Rudolph, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.69 / 1.98
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 95.239, 95.239, 116.562, 90.00, 90.00, 90.00
R / Rfree (%) 17.2 / 20.4

Other elements in 5pa8:

The structure of Crystal Structure of Factor Viia in Complex with Cyclohexanamine also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Factor Viia in Complex with Cyclohexanamine (pdb code 5pa8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Factor Viia in Complex with Cyclohexanamine, PDB code: 5pa8:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5pa8

Go back to Chlorine Binding Sites List in 5pa8
Chlorine binding site 1 out of 2 in the Crystal Structure of Factor Viia in Complex with Cyclohexanamine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Factor Viia in Complex with Cyclohexanamine within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl502

b:73.8
occ:1.00
O C:HOH675 3.5 52.4 1.0
O C:HOH755 3.6 54.2 1.0
N C:GLU454 3.6 41.1 1.0
CA C:SER453 3.9 41.7 1.0
CB C:SER453 4.1 41.6 1.0
O C:HOH812 4.2 62.8 1.0
C C:SER453 4.3 41.4 1.0
CB C:GLU454 4.5 41.0 1.0
CG C:GLU454 4.6 39.3 1.0
CA C:GLU454 4.6 41.3 1.0

Chlorine binding site 2 out of 2 in 5pa8

Go back to Chlorine Binding Sites List in 5pa8
Chlorine binding site 2 out of 2 in the Crystal Structure of Factor Viia in Complex with Cyclohexanamine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Factor Viia in Complex with Cyclohexanamine within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl503

b:80.0
occ:1.00
NE C:ARG262 3.2 57.1 0.5
NH2 C:ARG262 3.6 56.3 0.5
N C:VAL459 3.6 43.7 1.0
CZ C:ARG262 3.8 57.1 0.5
CA C:GLY458 3.8 44.9 0.5
NH1 C:ARG262 3.8 56.0 0.5
CA C:GLY458 3.8 45.1 0.5
CD C:ARG262 4.0 56.8 0.5
CG2 C:VAL459 4.1 43.3 1.0
C C:GLY458 4.3 44.4 0.5
C C:GLY458 4.3 44.6 0.5
CD C:ARG262 4.4 55.6 0.5
CB C:VAL459 4.5 43.1 1.0
CG C:ARG262 4.6 55.6 0.5
CG C:ARG262 4.7 56.1 0.5
CA C:VAL459 4.7 43.2 1.0
CZ C:ARG262 4.7 55.9 0.5
NH2 C:ARG262 4.8 58.3 0.5
N C:GLY458 4.8 45.3 0.5
N C:GLY458 4.8 45.2 0.5
O4 C:SO4506 5.0 80.0 1.0
CB C:TRP261 5.0 57.1 1.0

Reference:

A.Mayweg, S.Roever, M.G.Rudolph. Crystal Structure of A Factor Viia Complex To Be Published.
Page generated: Sat Jul 12 07:11:24 2025

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