Atomistry » Chlorine » PDB 5qhx-5qjn » 5qjl
Atomistry »
  Chlorine »
    PDB 5qhx-5qjn »
      5qjl »

Chlorine in PDB 5qjl: Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT5 in Complex with Z56983806

Enzymatic activity of Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT5 in Complex with Z56983806

All present enzymatic activity of Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT5 in Complex with Z56983806:
2.7.7.96; 3.6.1.13; 3.6.1.58;

Protein crystallography data

The structure of Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT5 in Complex with Z56983806, PDB code: 5qjl was solved by Y.Dubianok, P.Collins, T.Krojer, N.Wright, C.Strain-Damerell, N.Burgess-Brown, C.Bountra, C.H.Arrowsmith, A.Edwards, K.Huber, F.Von Delft, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 78.29 / 1.66
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 48.890, 59.510, 79.980, 79.68, 82.07, 76.20
R / Rfree (%) 20.8 / 24.1

Other elements in 5qjl:

The structure of Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT5 in Complex with Z56983806 also contains other interesting chemical elements:

Magnesium (Mg) 8 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT5 in Complex with Z56983806 (pdb code 5qjl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT5 in Complex with Z56983806, PDB code: 5qjl:

Chlorine binding site 1 out of 1 in 5qjl

Go back to Chlorine Binding Sites List in 5qjl
Chlorine binding site 1 out of 1 in the Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT5 in Complex with Z56983806


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of NUDT5 in Complex with Z56983806 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:67.9
occ:1.00
O B:HOH423 4.0 38.1 1.0
CG2 B:THR145 4.0 30.1 1.0
ND1 A:HIS206 4.2 31.0 1.0
CG2 B:VAL67 4.2 34.7 1.0
CG A:HIS206 4.2 27.2 1.0
CE1 A:HIS206 4.3 26.8 1.0
CG2 B:THR147 4.4 35.9 1.0
CD2 A:HIS206 4.5 23.7 1.0
NE2 A:HIS206 4.5 30.0 1.0
CB B:VAL67 4.6 31.2 1.0
CG1 B:VAL67 4.7 31.4 1.0
CB A:HIS206 4.7 25.5 1.0
O A:HOH472 4.9 44.9 1.0

Reference:

Y.Dubianok, P.Collins, T.Krojer, N.Wright, C.Strain-Damerell, N.Burgess-Brown, C.Bountra, C.H.Arrowsmith, A.Edwards, K.Huber, F.Von Delft. Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) To Be Published.
Page generated: Sat Jul 12 07:43:13 2025

Last articles

Mg in 4NH1
Mg in 4NH0
Mg in 4NI5
Mg in 4NG6
Mg in 4NG4
Mg in 4NFJ
Mg in 4NFI
Mg in 4NFL
Mg in 4NEU
Mg in 4NEN
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy