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Chlorine in PDB 5qrg: Pandda Analysis Group Deposition -- Crystal Structure of Human Brachyury in Complex with Z275151340

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- Crystal Structure of Human Brachyury in Complex with Z275151340, PDB code: 5qrg was solved by J.A.Newman, A.E.Gavard, A.Fernandez-Cid, L.Sherestha, N.A.Burgess-Brown, F.Von Delft, C.H.Arrowsmith, A.Edwards, C.Bountra, O.Gileadi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 59.74 / 1.95
Space group P 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 59.740, 59.740, 110.350, 90.00, 90.00, 90.00
R / Rfree (%) 21.8 / 28.1

Other elements in 5qrg:

The structure of Pandda Analysis Group Deposition -- Crystal Structure of Human Brachyury in Complex with Z275151340 also contains other interesting chemical elements:

Cadmium (Cd) 5 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Pandda Analysis Group Deposition -- Crystal Structure of Human Brachyury in Complex with Z275151340 (pdb code 5qrg). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Pandda Analysis Group Deposition -- Crystal Structure of Human Brachyury in Complex with Z275151340, PDB code: 5qrg:

Chlorine binding site 1 out of 1 in 5qrg

Go back to Chlorine Binding Sites List in 5qrg
Chlorine binding site 1 out of 1 in the Pandda Analysis Group Deposition -- Crystal Structure of Human Brachyury in Complex with Z275151340


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pandda Analysis Group Deposition -- Crystal Structure of Human Brachyury in Complex with Z275151340 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl306

b:61.0
occ:0.76
CL15 A:JHP306 0.0 61.0 0.8
C04 A:JHP306 1.6 66.7 0.8
C05 A:JHP306 2.7 66.2 0.8
C03 A:JHP306 2.7 68.5 0.8
O08 A:JHP306 3.0 58.3 0.8
O A:SER129 3.2 37.4 0.8
C07 A:JHP306 3.3 65.3 0.8
C A:SER129 3.6 34.0 0.8
CD A:PRO130 3.7 37.7 0.8
N02 A:JHP306 3.8 72.1 0.8
N06 A:JHP306 3.9 70.1 0.8
N A:PRO130 3.9 35.4 0.8
CG2 A:ILE125 3.9 38.2 1.0
CB A:SER129 4.0 31.3 0.8
CA A:SER129 4.4 33.1 0.8
N09 A:JHP306 4.6 63.4 0.8
CD1 A:ILE125 4.8 49.1 1.0
CG A:PRO130 4.9 37.1 0.8

Reference:

J.A.Newman, A.E.Gavard, A.Fernandez-Cid, L.Sherestha, N.A.Burgess-Brown, F.Von Delft, C.H.Arrowsmith, A.Edwards, C.Bountra, O.Gileadi. Pandda Analysis Group Deposition To Be Published.
Page generated: Fri Jul 26 15:51:51 2024

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