Atomistry » Chlorine » PDB 5rkr-5s2y » 5rz4
Atomistry »
  Chlorine »
    PDB 5rkr-5s2y »
      5rz4 »

Chlorine in PDB 5rz4: EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909

Protein crystallography data

The structure of EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909, PDB code: 5rz4 was solved by W.J.Bradshaw, V.L.Katis, J.A.Newman, F.Von Delft, C.H.Arrowsmith, A.M.Edwards, C.Bountra, O.Gileadi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.93 / 1.61
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 38.420, 77.320, 99.700, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 23.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909 (pdb code 5rz4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909, PDB code: 5rz4:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 5rz4

Go back to Chlorine Binding Sites List in 5rz4
Chlorine binding site 1 out of 4 in the EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:59.9
occ:0.60
CL A:WH7401 0.0 59.9 0.6
C5 A:WH7401 1.7 53.2 0.6
C4 A:WH7401 2.7 53.4 0.6
C6 A:WH7401 2.7 50.7 0.6
C3 A:WH7401 3.0 52.5 0.6
OE2 A:GLU310 3.4 37.2 0.6
C9 A:WH7401 4.0 51.7 0.6
CD A:GLU310 4.0 37.1 0.6
C7 A:WH7401 4.0 50.5 0.6
N A:WH7401 4.5 54.8 0.6
C8 A:WH7401 4.5 50.4 0.6
OE1 A:GLU310 4.6 39.2 0.6
CG A:GLU310 4.6 36.3 0.6

Chlorine binding site 2 out of 4 in 5rz4

Go back to Chlorine Binding Sites List in 5rz4
Chlorine binding site 2 out of 4 in the EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:56.8
occ:0.60
CL1 A:WH7401 0.0 56.8 0.6
C9 A:WH7401 1.7 51.7 0.6
N A:WH7401 2.4 54.8 0.6
C8 A:WH7401 2.7 50.4 0.6
C4 A:WH7401 2.7 53.4 0.6
C3 A:WH7401 3.1 52.5 0.6
CE1 A:HIS302 3.5 41.8 1.0
C2 A:WH7401 3.7 55.0 0.6
ND1 A:HIS302 3.9 44.4 1.0
C5 A:WH7401 4.0 53.2 0.6
C7 A:WH7401 4.0 50.5 0.6
NE2 A:HIS302 4.0 45.7 1.0
O A:WH7401 4.2 54.2 0.6
C6 A:WH7401 4.5 50.7 0.6
C1 A:WH7401 4.6 54.8 0.6
CG A:HIS302 4.6 35.3 1.0
CD2 A:HIS302 4.6 37.8 1.0
OE1 A:GLU310 4.9 39.2 0.6

Chlorine binding site 3 out of 4 in 5rz4

Go back to Chlorine Binding Sites List in 5rz4
Chlorine binding site 3 out of 4 in the EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:59.2
occ:0.52
CL A:WH7402 0.0 59.2 0.5
C5 A:WH7402 1.7 53.8 0.5
C6 A:WH7402 2.6 53.0 0.5
C4 A:WH7402 2.7 53.1 0.5
N A:WH7402 2.9 55.1 0.5
C3 A:WH7402 3.1 53.3 0.5
C7 A:WH7402 3.9 49.4 0.5
C9 A:WH7402 3.9 52.2 0.5
ND1 A:HIS181 3.9 26.1 1.0
C2 A:WH7402 4.3 58.6 0.5
C8 A:WH7402 4.4 50.1 0.5
CE1 A:HIS181 4.5 27.5 1.0
C1 A:WH7402 4.5 60.3 0.5
C A:WH7402 4.5 60.0 0.5
O A:HOH652 5.0 22.8 0.5
CG A:HIS181 5.0 24.4 1.0

Chlorine binding site 4 out of 4 in 5rz4

Go back to Chlorine Binding Sites List in 5rz4
Chlorine binding site 4 out of 4 in the EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:57.2
occ:0.52
CL1 A:WH7402 0.0 57.2 0.5
C9 A:WH7402 1.7 52.2 0.5
C8 A:WH7402 2.6 50.1 0.5
C4 A:WH7402 2.7 53.1 0.5
C3 A:WH7402 3.1 53.3 0.5
O A:LYS113 3.4 18.4 1.0
CD1 A:ILE115 3.5 31.4 1.0
CB A:LYS113 3.5 28.2 1.0
C A:LYS113 3.5 18.1 1.0
CG1 A:ILE115 3.6 26.5 1.0
O A:PHE182 3.9 18.4 1.0
OE2 A:GLU121 3.9 60.2 1.0
C7 A:WH7402 3.9 49.4 0.5
C5 A:WH7402 3.9 53.8 0.5
N A:VAL114 4.0 18.2 1.0
CB A:HIS181 4.0 20.2 1.0
N A:ILE115 4.0 15.6 1.0
CG A:HIS181 4.1 24.4 1.0
CA A:LYS113 4.2 21.0 1.0
N A:PHE182 4.2 16.7 1.0
CA A:HIS181 4.3 17.3 1.0
N A:WH7402 4.3 55.1 0.5
C A:VAL114 4.3 16.8 1.0
CA A:VAL114 4.3 18.8 1.0
C6 A:WH7402 4.5 53.0 0.5
CD2 A:HIS181 4.5 29.1 1.0
CD A:GLU121 4.5 50.9 1.0
C2 A:WH7402 4.6 58.6 0.5
CG A:GLU121 4.6 45.6 1.0
C A:HIS181 4.6 15.6 1.0
ND1 A:HIS181 4.7 26.1 1.0
CB A:ILE115 4.7 21.6 1.0
CA A:ILE115 4.8 19.1 1.0
CG A:LYS113 4.8 33.4 1.0
C A:PHE182 4.9 17.6 1.0
C1 A:WH7402 4.9 60.3 0.5

Reference:

W.J.Bradshaw, V.L.Katis, J.A.Newman, F.Von Delft, C.H.Arrowsmith, A.M.Edwards, C.Bountra, O.Gileadi. EPB41L3 Pandda Analysis Group Deposition To Be Published.
Page generated: Sat Jul 12 08:17:14 2025

Last articles

F in 7N33
F in 7N4Q
F in 7N4N
F in 7N2A
F in 7MXY
F in 7MYY
F in 7N13
F in 7MYU
F in 7MYR
F in 7MYO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy