Atomistry » Chlorine » PDB 5rkr-5s2y » 5rz4
Atomistry »
  Chlorine »
    PDB 5rkr-5s2y »
      5rz4 »

Chlorine in PDB 5rz4: EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909

Protein crystallography data

The structure of EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909, PDB code: 5rz4 was solved by W.J.Bradshaw, V.L.Katis, J.A.Newman, F.Von Delft, C.H.Arrowsmith, A.M.Edwards, C.Bountra, O.Gileadi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.93 / 1.61
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 38.420, 77.320, 99.700, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 23.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909 (pdb code 5rz4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909, PDB code: 5rz4:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 5rz4

Go back to Chlorine Binding Sites List in 5rz4
Chlorine binding site 1 out of 4 in the EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:59.9
occ:0.60
CL A:WH7401 0.0 59.9 0.6
C5 A:WH7401 1.7 53.2 0.6
C4 A:WH7401 2.7 53.4 0.6
C6 A:WH7401 2.7 50.7 0.6
C3 A:WH7401 3.0 52.5 0.6
OE2 A:GLU310 3.4 37.2 0.6
C9 A:WH7401 4.0 51.7 0.6
CD A:GLU310 4.0 37.1 0.6
C7 A:WH7401 4.0 50.5 0.6
N A:WH7401 4.5 54.8 0.6
C8 A:WH7401 4.5 50.4 0.6
OE1 A:GLU310 4.6 39.2 0.6
CG A:GLU310 4.6 36.3 0.6

Chlorine binding site 2 out of 4 in 5rz4

Go back to Chlorine Binding Sites List in 5rz4
Chlorine binding site 2 out of 4 in the EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:56.8
occ:0.60
CL1 A:WH7401 0.0 56.8 0.6
C9 A:WH7401 1.7 51.7 0.6
N A:WH7401 2.4 54.8 0.6
C8 A:WH7401 2.7 50.4 0.6
C4 A:WH7401 2.7 53.4 0.6
C3 A:WH7401 3.1 52.5 0.6
CE1 A:HIS302 3.5 41.8 1.0
C2 A:WH7401 3.7 55.0 0.6
ND1 A:HIS302 3.9 44.4 1.0
C5 A:WH7401 4.0 53.2 0.6
C7 A:WH7401 4.0 50.5 0.6
NE2 A:HIS302 4.0 45.7 1.0
O A:WH7401 4.2 54.2 0.6
C6 A:WH7401 4.5 50.7 0.6
C1 A:WH7401 4.6 54.8 0.6
CG A:HIS302 4.6 35.3 1.0
CD2 A:HIS302 4.6 37.8 1.0
OE1 A:GLU310 4.9 39.2 0.6

Chlorine binding site 3 out of 4 in 5rz4

Go back to Chlorine Binding Sites List in 5rz4
Chlorine binding site 3 out of 4 in the EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:59.2
occ:0.52
CL A:WH7402 0.0 59.2 0.5
C5 A:WH7402 1.7 53.8 0.5
C6 A:WH7402 2.6 53.0 0.5
C4 A:WH7402 2.7 53.1 0.5
N A:WH7402 2.9 55.1 0.5
C3 A:WH7402 3.1 53.3 0.5
C7 A:WH7402 3.9 49.4 0.5
C9 A:WH7402 3.9 52.2 0.5
ND1 A:HIS181 3.9 26.1 1.0
C2 A:WH7402 4.3 58.6 0.5
C8 A:WH7402 4.4 50.1 0.5
CE1 A:HIS181 4.5 27.5 1.0
C1 A:WH7402 4.5 60.3 0.5
C A:WH7402 4.5 60.0 0.5
O A:HOH652 5.0 22.8 0.5
CG A:HIS181 5.0 24.4 1.0

Chlorine binding site 4 out of 4 in 5rz4

Go back to Chlorine Binding Sites List in 5rz4
Chlorine binding site 4 out of 4 in the EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of EPB41L3 Pandda Analysis Group Deposition -- Crystal Structure of the Ferm Domain of Human EPB41L3 in Complex with Z2856434909 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:57.2
occ:0.52
CL1 A:WH7402 0.0 57.2 0.5
C9 A:WH7402 1.7 52.2 0.5
C8 A:WH7402 2.6 50.1 0.5
C4 A:WH7402 2.7 53.1 0.5
C3 A:WH7402 3.1 53.3 0.5
O A:LYS113 3.4 18.4 1.0
CD1 A:ILE115 3.5 31.4 1.0
CB A:LYS113 3.5 28.2 1.0
C A:LYS113 3.5 18.1 1.0
CG1 A:ILE115 3.6 26.5 1.0
O A:PHE182 3.9 18.4 1.0
OE2 A:GLU121 3.9 60.2 1.0
C7 A:WH7402 3.9 49.4 0.5
C5 A:WH7402 3.9 53.8 0.5
N A:VAL114 4.0 18.2 1.0
CB A:HIS181 4.0 20.2 1.0
N A:ILE115 4.0 15.6 1.0
CG A:HIS181 4.1 24.4 1.0
CA A:LYS113 4.2 21.0 1.0
N A:PHE182 4.2 16.7 1.0
CA A:HIS181 4.3 17.3 1.0
N A:WH7402 4.3 55.1 0.5
C A:VAL114 4.3 16.8 1.0
CA A:VAL114 4.3 18.8 1.0
C6 A:WH7402 4.5 53.0 0.5
CD2 A:HIS181 4.5 29.1 1.0
CD A:GLU121 4.5 50.9 1.0
C2 A:WH7402 4.6 58.6 0.5
CG A:GLU121 4.6 45.6 1.0
C A:HIS181 4.6 15.6 1.0
ND1 A:HIS181 4.7 26.1 1.0
CB A:ILE115 4.7 21.6 1.0
CA A:ILE115 4.8 19.1 1.0
CG A:LYS113 4.8 33.4 1.0
C A:PHE182 4.9 17.6 1.0
C1 A:WH7402 4.9 60.3 0.5

Reference:

W.J.Bradshaw, V.L.Katis, J.A.Newman, F.Von Delft, C.H.Arrowsmith, A.M.Edwards, C.Bountra, O.Gileadi. EPB41L3 Pandda Analysis Group Deposition To Be Published.
Page generated: Fri Jul 26 16:36:56 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy