Atomistry » Chlorine » PDB 5s33-5sdc » 5sbb
Atomistry »
  Chlorine »
    PDB 5s33-5sdc »
      5sbb »

Chlorine in PDB 5sbb: Tubulin-Maytansinoid-4C-Complex

Protein crystallography data

The structure of Tubulin-Maytansinoid-4C-Complex, PDB code: 5sbb was solved by P.Marzullo, Z.Boiarska, H.Perez-Pena, A.-C.Abel, B.Alvarez-Bernad, D.Lucena-Agell, F.Vasile, M.Sironi, M.O.Steinmetz, A.E.Prota, J.F.Diaz, S.Pieraccini, D.Passarella, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.54 / 2.25
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 104.615, 157.484, 180.633, 90, 90, 90
R / Rfree (%) 18.3 / 22.8

Other elements in 5sbb:

The structure of Tubulin-Maytansinoid-4C-Complex also contains other interesting chemical elements:

Calcium (Ca) 4 atoms
Magnesium (Mg) 5 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Tubulin-Maytansinoid-4C-Complex (pdb code 5sbb). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Tubulin-Maytansinoid-4C-Complex, PDB code: 5sbb:

Chlorine binding site 1 out of 1 in 5sbb

Go back to Chlorine Binding Sites List in 5sbb
Chlorine binding site 1 out of 1 in the Tubulin-Maytansinoid-4C-Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Tubulin-Maytansinoid-4C-Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl503

b:98.4
occ:1.00
CL33 D:5JH503 0.0 98.4 1.0
C6 D:5JH503 1.8 79.8 1.0
C1 D:5JH503 2.7 79.0 1.0
C5 D:5JH503 2.8 80.3 1.0
O34 D:5JH503 2.9 75.0 1.0
N31 D:5JH503 3.2 82.3 1.0
C36 D:5JH503 3.5 77.9 1.0
C35 D:5JH503 3.6 66.5 1.0
CZ D:PHE404 3.8 87.5 1.0
C28 D:5JH503 3.9 78.0 1.0
CG2 D:VAL181 4.0 79.0 1.0
C2 D:5JH503 4.0 78.2 1.0
C4 D:5JH503 4.1 76.0 1.0
C27 D:5JH503 4.2 63.7 1.0
CE2 D:PHE404 4.3 81.6 1.0
CG1 D:VAL181 4.4 70.1 1.0
C3 D:5JH503 4.6 74.9 1.0
O32 D:5JH503 4.7 84.1 1.0
CE1 D:PHE404 4.8 85.4 1.0
CB D:VAL181 4.9 68.6 1.0

Reference:

P.Marzullo, Z.Boiarska, H.Perez-Pena, A.C.Abel, B.Alvarez-Bernad, D.Lucena-Agell, F.Vasile, M.Sironi, K.H.Altmann, A.E.Prota, J.F.Diaz, S.Pieraccini, D.Passarella. Maytansinol Derivatives: Side Reactions As A Chance For New Tubulin Binders. Chemistry 2021.
ISSN: ISSN 0947-6539
PubMed: 34788896
DOI: 10.1002/CHEM.202103520
Page generated: Sat Jul 12 08:20:21 2025

Last articles

Co in 2GG8
Co in 2GG7
Co in 2GG5
Co in 2GG0
Co in 2GG2
Co in 2GG3
Co in 2G6P
Co in 2FIL
Co in 2G5K
Co in 2G6F
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy