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Chlorine in PDB 5svh: Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera

Enzymatic activity of Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera

All present enzymatic activity of Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera:
2.1.1.43; 2.3.1.48;

Protein crystallography data

The structure of Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera, PDB code: 5svh was solved by D.N.Langelaan, S.P.Smith, J.A.Allingham, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 59.90 / 2.05
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 119.820, 119.820, 50.430, 90.00, 90.00, 120.00
R / Rfree (%) 20.6 / 24.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera (pdb code 5svh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 7 binding sites of Chlorine where determined in the Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera, PDB code: 5svh:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7;

Chlorine binding site 1 out of 7 in 5svh

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Chlorine binding site 1 out of 7 in the Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl702

b:90.6
occ:1.00
 NH1 A:ARG623 3.1 65.6 1.0
NH1 A:ARG624 4.1 48.3 0.5
NH2 A:ARG624 4.2 56.7 0.5
CZ A:ARG623 4.4 67.5 1.0
CZ A:ARG624 4.6 53.1 0.5

Chlorine binding site 2 out of 7 in 5svh

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Chlorine binding site 2 out of 7 in the Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl703

b:73.7
occ:1.00
 O A:HOH841 2.9 52.2 1.0
CE A:LYS662 3.4 67.1 1.0
CD A:LYS662 3.8 58.0 1.0
NZ A:LYS662 3.9 56.8 1.0
CE2 A:TYR658 4.4 37.1 1.0

Chlorine binding site 3 out of 7 in 5svh

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Chlorine binding site 3 out of 7 in the Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl704

b:88.5
occ:1.00
 O A:HOH812 3.1 76.1 1.0
N A:GLY590 3.5 71.4 1.0
N A:LYS589 3.7 77.5 1.0
N A:ARG588 3.8 71.7 1.0
O A:HOH869 4.1 78.0 1.0
CA A:GLY590 4.1 69.0 1.0
C A:LYS589 4.3 71.0 1.0
CA A:LYS589 4.5 73.4 1.0
CA A:ARG588 4.6 69.4 1.0
C A:ARG588 4.7 76.2 1.0
CB A:ARG588 4.9 76.6 1.0
CB A:LYS589 5.0 76.6 1.0

Chlorine binding site 4 out of 7 in 5svh

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Chlorine binding site 4 out of 7 in the Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl705

b:91.0
occ:1.00
 NZ A:LYS667 3.4 72.1 1.0
CE A:LYS667 3.6 69.7 1.0
NH2 A:ARG671 4.0 70.2 1.0
NE A:ARG671 4.3 66.2 1.0
CZ A:ARG671 4.6 65.4 1.0

Chlorine binding site 5 out of 7 in 5svh

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Chlorine binding site 5 out of 7 in the Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl706

b:91.2
occ:1.00
 O A:HOH819 3.4 62.6 1.0
NH1 A:ARG600 3.6 51.0 1.0
CZ A:ARG600 4.6 53.3 1.0
NH2 A:ARG600 4.7 48.4 1.0
NE2 A:GLN597 4.9 65.0 1.0
OE1 A:GLN597 5.0 67.0 1.0

Chlorine binding site 6 out of 7 in 5svh

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Chlorine binding site 6 out of 7 in the Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl102

b:73.8
occ:0.50
 NZ B:LYS34 3.3 66.3 1.0
CD A:ARG669 4.2 63.1 1.0
CE B:LYS34 4.4 59.0 1.0
CB A:ARG669 4.7 52.1 1.0
CG A:ARG669 4.9 53.4 1.0
NH1 A:ARG669 4.9 77.2 1.0

Chlorine binding site 7 out of 7 in 5svh

Go back to Chlorine Binding Sites List in 5svh
Chlorine binding site 7 out of 7 in the Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of the Kix Domain of Cbp in Complex with A Mll/C-Myb Chimera within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl103

b:76.6
occ:1.00
 N B:SER21 3.3 46.5 1.0
OG B:SER21 3.8 53.7 1.0
CB B:SER21 3.9 49.2 1.0
CA B:PRO20 4.0 42.8 1.0
C B:PRO20 4.1 45.8 1.0
CA B:SER21 4.2 46.9 1.0
CB B:PRO20 4.6 42.4 1.0

Reference:

D.N.Langelaan, S.P.Smith. Design of A Nanomolar Affinity Ligand to the Kix Domain of Cbp To Be Published.
Page generated: Fri Jul 26 17:06:23 2024

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